Pseudoleptotrichia goodfellowii: JCM16774_1787
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Entry
JCM16774_1787 CDS
T06508
Name
(GenBank) WD-repeat family protein
Organism
lgo
Pseudoleptotrichia goodfellowii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
EIF3I
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
TIR_2
WD40
ThsB_TIR
Beta-prop_CAF1B_HIR1
TIR
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
RMC1_N
Beta-prop_ACSF4
Beta-prop_RIG_2nd
DUF2721
Motif
Other DBs
NCBI-ProteinID:
BBM36841
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Position
1769562..1772615
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AA seq
1017 aa
AA seq
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MPENKEDLQNKKNENSERKYKYDAFISYRHTEPDFTIAKNLHSMIEKFKVPKHLSENSSN
ETREFRVFRDREELSTKDLSTMIQEGLKESENLIVICSRRTPLSPWCRKEVQLFKEMHGS
DNIIPVLIEGNPDESFIDELKNLKMTFINSNNEEEEKDIELLAADLRPEEIKSSSFKGYE
TLQNEKAPELNELTKKSLNILKKSEIYRIMASMLNVNYGDLKLRHQERRMKRIIYASISA
VLVMFLFIVSVTTLYLKSVVSERKANEQSVLMTLNMANDANSQGNRALAMLIAKEAMKNS
TSKMDQYDKLIAQYTNILNNSLITLPFSNEFILPTESETAAFSISSDSKRLVSPGSFNSA
NIWDLENGGIIKTLTFDAPVTSLALSPDNKKIYAGTASNKLFEVNTDNYEIKEAFEASQL
PVNAIIISKNNKYMYVLRGFLIFDVFDIQNHKKLHSFSFDFENRITGFKENPVTNNFFIL
KKDNSITEYNINTGQVAAIHAPAIPPESSFRRELEISDNGILFYSDMENNSVKIVMKNLQ
TGQINTANNLKVSTFDIEVDKEAKVLYTHSFGNFVTRFDLSNLKPNEEINTPQRMMYLNI
ENNESIKNIKLSPDDNTLAVILANRTVGAFTNLKNMPQNSVSQFILNEKSTHKNTVNIIK
FTPDSKKIITSAADSTIRVMNTKAYLGEIQSLNGKIVSSSRDKNSILILSGDQLSKYSFA
DNKEVPLAHLHPKYLHILQMFATTNDVSLVALSPGNSTSADVFDVKQNKKVYTTKPHAVK
PGNIPVLSKISFSNDGKFLFTLGPDSCLFVHDAKTGKFLFSLEDKENGIAASFVLSNDDN
FVALNYTTGKSTIFSLETKKIVQKLDGEILAVNSENKKIKIIYGQVENKLFYSTSNNKII
KYADNKIKTATGTTKFNTVNISFDGKYYISGIPKNNTVITDLNTGETIRTLYTDTNKYFV
SLPVINKDNRKIAYNNDENRIIITDMYSLEELSKKADEMLKGRKMTESELNSIGRRK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaataaagaagatttacaaaataagaaaaatgaaaattccgaaagaaaatat
aaatacgatgcttttataagttacagacataccgaacctgattttacaatagcaaagaat
cttcattctatgattgaaaagtttaaagtaccgaaacatctctctgaaaattcgtcaaat
gaaacaagagagttcagagtatttcgggatcgtgaagaactttccacaaaagacttaagt
acaatgatacaggaaggattgaaggaatcggaaaacctgatcgtaatctgttccagaaga
actccgctcagtccatggtgtcgaaaagaggtgcagttattcaaagaaatgcacggctct
gacaatattattcccgtgcttatcgaaggaaaccctgacgaatcctttattgatgaattg
aaaaacttaaaaatgacatttataaattcaaacaatgaagaagaggaaaaagacatagaa
cttcttgcagcagaccttagacccgaagaaataaaatcttcttcttttaaaggatatgaa
actttacaaaatgagaaagctcctgaattaaacgaacttacaaaaaaatctctaaacatt
ttgaaaaaatctgaaatctacagaataatggcgagtatgctgaatgtgaactacggagat
ttgaaattaagacatcaggaaagacgtatgaaaaggattatttatgcttcaataagtgct
gttcttgttatgttcctgtttattgtaagtgtaacaaccctttatttaaaatctgttgtg
tccgaaagaaaagccaacgaacagtcggtactcatgacactgaatatggcgaacgatgcg
aacagccaaggtaaccgagctctcgcaatgcttattgccaaagaagccatgaaaaattcc
acttccaaaatggatcaatacgataaactgattgctcaatacactaacattttaaataat
tcattgattactctgcctttttcaaatgaatttatcttgcctaccgaaagtgaaacagct
gctttcagtataagttccgacagcaaaaggctcgtaagtccgggctctttcaatagtgca
aatatttgggatttggaaaacggcggtattataaaaacattgacatttgatgcccctgtt
acttcacttgcactttctcccgacaataagaaaatatatgcagggactgcaagtaacaaa
ctttttgaagtaaacactgataattatgagattaaagaagcatttgaagcatctcaactt
cctgtaaatgcgattattatttccaaaaacaataaatatatgtatgttttaagaggtttt
ttgatttttgatgtttttgatatacaaaatcataaaaaattgcattctttctcatttgac
tttgaaaacagaataacaggatttaaggaaaatcctgtaacaaataatttctttatactg
aaaaaagataactcaattactgaatataatataaatacagggcaggttgcggcaattcat
gctcctgcaatacctcctgaaagcagtttcagaagagagcttgaaatttccgataacggc
atacttttttattcggatatggaaaataattcagtaaaaattgttatgaaaaatcttcaa
acaggacaaattaacacagcaaataatttaaaagtttcaactttcgatattgaagtggat
aaagaagcaaaagtattatacacacattctttcggtaattttgttacaagatttgattta
tcgaacttaaagcctaatgaagaaataaatacaccacaaagaatgatgtatcttaatatt
gaaaataatgaaagtataaaaaatataaaattgagtcctgatgacaatactcttgcagtc
attttggcaaacagaactgtaggtgcttttacaaacttgaaaaatatgcctcaaaattct
gtttcacaatttatacttaatgaaaaaagtacccacaaaaacactgtcaatataataaaa
tttactcctgacagtaaaaaaatcattacttctgcggcggattccacaataagagttatg
aatacaaaagcatatttaggagaaatacagtcattaaacggaaaaattgtttcatcttca
cgggataaaaattccatattgattttatcgggagatcagctttcaaaatacagttttgcg
gataataaagaagttcctttagctcatttacatcctaaatatcttcatatactccaaatg
ttcgcaacgacaaatgacgtttcactggttgcactttctccgggaaatagtacttcagca
gatgtttttgatgtaaaacagaataaaaaagtatacactacaaaacctcatgctgttaaa
ccgggaaatattcctgtactttcaaaaataagtttcagtaatgacggaaagttcttattt
acattaggacctgacagctgtttatttgtacatgatgccaaaacaggaaagtttctcttt
tctcttgaagataaagaaaacggaatagcagcttcatttgtattgagtaacgatgataat
tttgttgctctgaattatacgacaggaaagtcaactattttctctcttgaaacgaaaaag
attgtacaaaagttggacggagaaattttggcagttaacagtgaaaacaaaaaaattaaa
attatttacgggcaggttgaaaacaaattgttttattcaacttcaaataacaaaatcatt
aaatatgccgacaataaaattaaaactgctacaggaactacaaaattcaatactgtaaat
atttcttttgacggaaaatactatatttcagggattccgaaaaataatacagtaataacc
gacttaaataccggagaaacaataagaactctatataccgacacgaataaatattttgtt
tctcttcctgttataaataaagataacagaaaaattgcgtataacaatgatgaaaacaga
ataattataacggatatgtactctctcgaggaactttcaaaaaaagcggatgaaatgctg
aaaggcagaaaaatgacagaatctgaattgaactcaatcggaaggagaaaataa
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