Pseudoleptotrichia goodfellowii: JCM16774_1804
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Entry
JCM16774_1804 CDS
T06508
Name
(GenBank) zinc-binding CMP/dCMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo00240
Pyrimidine metabolism
lgo01100
Metabolic pathways
lgo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JCM16774_1804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lgo02044
]
JCM16774_1804
Enzymes [BR:
lgo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
JCM16774_1804
Secretion system [BR:
lgo02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
JCM16774_1804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
APOBEC_N
Bd3614-deam
SNAD4
APOBEC4_like
APOBEC2
NAD1
APOBEC4
Gin
APOBEC3
ISP3_C
Motif
Other DBs
NCBI-ProteinID:
BBM36858
UniProt:
A0A510JC05
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All DBs
Position
1789939..1790424
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AA seq
161 aa
AA seq
DB search
MNKRDDYLSWDEYFMGIAFLSGMRSKDPSTQVGACIIDEDKKIIGIGYNGFPMGSSDDNM
PWNKEGDFLNTKYPYVVHAELNAILNSIKSLKNAIIYVTHFPCNECAKAIVQSGIKKVIY
FSDKHKSLDATKASRKIFENAGVETIHLEIDKKEILIRFRD
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagagatgactatttatcttgggacgaatattttatgggtatagcattttta
tcgggaatgagaagcaaggatccgtctactcaagtcggagcctgtattatcgatgaggac
aaaaaaataatcggaatcgggtataacggctttcctatgggcagttccgatgacaatatg
ccctggaataaagaaggcgacttcctgaatacaaaatatccttatgtagttcatgccgaa
ttaaatgctatccttaacagcataaaatctcttaaaaatgcgattatttatgttactcat
tttccgtgtaatgaatgtgcaaaagctatcgttcaatcggggataaaaaaagtaatctac
ttttccgacaaacataaatcgcttgatgccacaaaggcttcaagaaaaatttttgaaaat
gccggtgtagaaactatccatttggaaatagataaaaaagaaattttgataagatttagg
gattag
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