Pseudoleptotrichia goodfellowii: JCM16774_2022
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Entry
JCM16774_2022 CDS
T06508
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JCM16774_2022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgo03021
]
JCM16774_2022
03400 DNA repair and recombination proteins [BR:
lgo03400
]
JCM16774_2022
Enzymes [BR:
lgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JCM16774_2022
Transcription machinery [BR:
lgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JCM16774_2022
DNA repair and recombination proteins [BR:
lgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JCM16774_2022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBM37070
UniProt:
A0A510JCP1
LinkDB
All DBs
Position
complement(2031010..2031978)
Genome browser
AA seq
322 aa
AA seq
DB search
MLNIEKIAKNIKLTEEKESRYTAKYTLEPLYRGYGNTIGNALRRILLSSIPGSAIKGLRI
DGVLNEFSTIPGVKEAVTDIILNVKEIVVELDEPGEKKMVLSVKGPKVITAADIKPDPGI
KIINPEQVIATVTTDKEINMEFLVDSGEGFVVSDEIDTEGWPIGYLAVDAIYTPIKRVTY
SVEDTMVGRVTNYDKLILEISTDGSIEIHDALSYAVELLILHVKPFTNIGNSMSKFRGNE
DENSSLNSETESNIEDMKIEELDFTVRSYNCLKKAGVNTISDLTSMTYVELLKIKNLGRK
SLNEIIDKMKELGYDLSEEAGN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatattgaaaaaatagctaaaaatataaaattgacagaagagaaagagagcaga
tatacagctaaatatacgttagagcctttgtacagaggatacggaaacactattggaaat
gcattaagaagaatattgttatcgtcaataccgggatcggctataaaaggtcttagaata
gacggtgtattaaatgaattttctacaatacccggagtaaaagaagctgttacggacata
atattaaatgtaaaagaaatagttgtcgagttggatgaaccgggagagaaaaaaatggta
ttatccgtaaagggacctaaagtaataactgcagcggacattaagcctgatcctggaatt
aaaattattaatcctgaacaggtcattgcaactgtaacaactgataaagaaattaatatg
gaatttttagttgattcgggagaaggatttgtagtttccgatgagatagatactgaaggt
tggcctataggatatttggcagtagatgcaatttatacacctattaaaagggttacatac
agtgtagaagatacaatggtaggaagagtaacaaactatgataaacttatattggaaatt
tctactgacggaagtattgaaatacatgatgctttatcttatgctgtcgaattgttaata
ttgcatgtaaaaccttttacaaatataggaaacagcatgagtaaattcagaggaaatgaa
gatgaaaattcttcattaaattctgaaactgaaagcaatatagaagatatgaaaattgag
gaacttgattttactgtaagatcttacaactgcttgaaaaaagcaggagtaaatacaata
tctgatttaacttcaatgacatatgtagaattattgaaaattaaaaatttagggagaaaa
tctctaaatgaaataatcgataaaatgaaagagcttggttacgatttaagtgaagaagcc
ggaaattaa
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