Pseudoleptotrichia goodfellowii: JCM16774_2250
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Entry
JCM16774_2250 CDS
T06508
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo00521
Streptomycin biosynthesis
lgo00523
Polyketide sugar unit biosynthesis
lgo00541
Biosynthesis of various nucleotide sugars
lgo01100
Metabolic pathways
lgo01110
Biosynthesis of secondary metabolites
lgo01250
Biosynthesis of nucleotide sugars
Module
lgo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JCM16774_2250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JCM16774_2250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JCM16774_2250 (rfbC)
Enzymes [BR:
lgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JCM16774_2250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
BBM37288
UniProt:
A0A510JDC8
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All DBs
Position
complement(2255712..2256284)
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AA seq
190 aa
AA seq
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MNNFTIKNTPIKDLVIIEPKVFGDSRGFFMETYNQKSFEELGLTMNFVQDNHSKSKKGVL
RGLHFQTKHTQGKLVRVIKGRVFDVAVDLRKESETYGQWYGVELSEENKLMFYVPERFAH
GFLTLDEDTEFVYRCTDLYAPEYDSGILWNDKTLNIDWKFEEFGINPEELTISEKDQKQQ
NFQPEKNYFE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttacaataaaaaatactccgataaaagatttggtaataatagagccgaaa
gtattcggagattcgagaggattttttatggaaacctataatcaaaaatcttttgaagaa
ttgggacttactatgaattttgttcaggataatcattccaagtcaaaaaaaggggttttg
aggggattgcattttcagacaaaacatacacagggaaaactggtaagagtgataaaaggg
cgtgtttttgatgttgcagtagatttaagaaaagaaagcgagacctacgggcaatggtac
ggagttgaactttccgaagaaaataaacttatgttttatgttcctgaaagatttgctcac
ggatttttgactttggatgaagatacggaatttgtatatagatgtactgatttatacgca
cctgaatatgacagcggtattttgtggaatgacaagacattgaatatagactggaaattt
gaagagttcggaataaatcccgaagaactgacaatttctgaaaaggatcaaaaacaacaa
aattttcaacctgaaaaaaattattttgaataa
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