Leptospira gorisiae: AB3N59_03405
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Entry
AB3N59_03405 CDS
T10747
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lgor Leptospira gorisiae
Pathway
lgor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3N59_03405 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgor03021
]
AB3N59_03405 (rpoC)
03400 DNA repair and recombination proteins [BR:
lgor03400
]
AB3N59_03405 (rpoC)
Enzymes [BR:
lgor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3N59_03405 (rpoC)
Transcription machinery [BR:
lgor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3N59_03405 (rpoC)
DNA repair and recombination proteins [BR:
lgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3N59_03405 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
XDD50855
LinkDB
All DBs
Position
1:736701..740921
Genome browser
AA seq
1406 aa
AA seq
DB search
MRSHNDFESITIRLASPDRIKEWSYGEVKKPETINYRTLKPEKDGLFCEKIFGTTKDWEC
YCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAPVSHIWYYRSVPSRMGLLLDM
TVNQLKSVLYFEKYVIIDPADSGRNRGELIDEEEYHAYLDEYGDKFVAGIGADAIKELLA
RIDVDAEARMIRQKIQDKDKISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKYHEMGLPKK
MALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDVLEYVVKEHPVMLNRAPTLHR
LGIQAFLPILVEGKAIKLHPLVCHAFNADFDGDHMAIHVPLTPKAQLETWMLMLSPHNIL
NPANGHPICGPTQDIVLGIYYLTSELPSEPGVPLKSFSNLDEVHYAIDRGVVEFRTKISV
YHQGKILETTPGRLIFNTILPEGYAYVNKALSDKETNKIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITNEERRKKVIEI
WTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQIRQLAGMRGLMAKPSGEIIE
LAIRSNFREGLSVLEFFISTHGARKGLADTALKTADAGYLTRRLVDISQDVIISEDDCGT
EESISLGIVKEGENVIVSLNDRVFGRYTAESIIDPVTDQVVYPRNTLITREVGQKIENLG
YDKIRVRSPLTCESKQGVCICCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTAIVNNINGRLLRNDKEQNLFSRRGSIVIQRLIQQYKVEELS
NLRVENGQKVDKGELVATAPSGENITSEMPGTIHIENGVFRILGEEAVIPVKTGTVVNVK
VNDITQPNQPIAEFDPYNEVGISEFEGSIQWMDLEIGKNVRRDEDVKTSNILLKVIEQRR
EKLNPRIAVVSGSSREEYSVPVDALISVQDGDKVRAGDILFKIPTVAEKTRDITGGLPRV
DELFEARRPKDATTLAETDGRIEISGEIVKEKRILYIHPDNPDQEKVKVAIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHINDKHIEVVVRQ
MLRKVLITDSGDTGFVNQQQIDRLVFNEENRRVVAEGGSPADSVPILLGLTKASLNTESF
FSAASFQETTKVLTDAAIKGKTDNLMGLKENVIIGHMIPAGTGTKKYKDIAVFKSTYGDL
DRPLEIEEEEEIPQAIAEESDADGDE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagatcccataacgacttcgaatcgattacaatccgcctggcttctcccgacaggatc
aaagaatggtcctacggcgaagtgaaaaaaccggagaccatcaactaccggactttaaaa
cccgagaaagacggtcttttctgcgagaaaattttcggaaccacaaaagactgggaatgt
tactgcggtaagtttaagtctattcgttataagggcgtggtttgcgataagtgcggggtc
gaggtaactcactctaaagtacgtcgggaaagaatggggcatatcgaactcgctgccccg
gtttctcatatctggtattatcgttccgttccttccagaatgggacttttgcttgatatg
actgtgaaccagttaaaaagcgttctttactttgaaaaatacgtaatcatcgatcctgcg
gattcgggaagaaaccgcggcgagcttatcgacgaagaagaatatcacgcttacctcgac
gagtacggcgataagtttgtagcagggatcggcgcggacgcgatcaaggaacttctggct
cgtatcgatgtggatgccgaagcgagaatgattcgccaaaaaatccaagacaaagacaaa
atctccgataagagaattctgaaacgtctcgaggttctcgaagcgttccgtgattccgga
aaccgtcccgagtggatggtgctcgacatcgttcccgtcattcctccggaacttcgtcct
atggttcagctggaaggcggtagatttgcgacttccgacttgaacgacttataccgtcgt
gtcatcaaccgtaacaaccgtctcaagagacttctcgctctgaaagctcctgagatcatc
gttcgtaacgaaaagagaatgttgcaggaagcggtggacgctctgtttgacaactctcgt
agaaaacgcgcggtcaaagggaagggaaaccgtcctttgaaatccatctccgatatgctc
aaagggaaacaaggtcgtttccgtcagaaccttctcggtaagcgggtagactactccggt
cgttccgtgatcgtagtcggtcccgagctgaaataccacgagatgggtcttccaaagaaa
atggctttggaacttttcaaaccttttatcatgaagagacttgtggatttggacttagct
ccgaacatcaagtccgctaaaaagaaagtggaagcagaagacaaagaagttttcgacgta
ttggaatacgtggtaaaagagcatcctgtcatgttgaacagagctccgacccttcaccgt
cttgggatccaggcatttttaccgatccttgtggaaggaaaggcgatcaaacttcatcct
ctcgtctgtcatgcgttcaacgccgacttcgacggggatcatatggcgatccacgttcct
ctgactccaaaggctcagttggaaacttggatgttgatgctttctcctcacaacattctc
aaccccgcaaacggacatccgatctgcgggccgactcaggatatcgtactcggaatttat
tatttaacttccgaactcccgtccgagcccggagttcctctgaaatccttttcgaacttg
gatgaagttcactacgcgatcgacagaggcgttgtggaatttagaactaaaatcagcgtt
tatcaccaagggaaaattctggaaaccactccgggaagattgatctttaacacgattctt
ccggaaggttacgcttatgtaaacaaggctctttccgataaggaaacaaacaagatcatc
gccgacgtatatgataaatacggtcccgctaaaacagtattgatgctagacgatattaaa
aaattaggatatcgttatgcgactttgtttgctcctaccatttccatcgaagacattcga
gtgtctccgggtaaagtgggtcttgtcggagacgcgaacaaggaagtcgaaaaagccgac
tccgagtatcgcaaagggattatcacaaacgaagaacgccgtaaaaaggtaatcgagatc
tggacaaaaaccaacgacctcatcaccgaatcgatgttcaaggaactggaaaaagacaag
ggcgggtttaatccggtatttatcatggcggcttccggtgcgagaggatcaaaacaacag
attcgtcagctcgcgggaatgcggggtttgatggcgaaaccttcgggagaaatcatcgag
ctcgcgatccgttcgaacttccgcgaaggactttcggttcttgaattttttatttccact
cacggtgcgagaaaaggtctcgcggatactgcgttaaaaaccgcggatgcgggttacttg
actcgtcgtcttgtggacatttcccaagacgtgatcatctccgaagacgattgcggaacc
gaagaatccatttctctcggtatcgtaaaagaaggagagaatgtaattgtttctctgaac
gatcgtgtattcggtcgttatactgcggaaagcatcatcgatcctgtgaccgatcaagtc
gtctatccaagaaataccctgattacgagagaagtcggacaaaagatcgaaaacctcggc
tacgataagatccgggttcgttctccgttgacttgcgaatcaaaacaaggtgtttgtatc
tgctgttacggtatggacatggcgagactcattcctgcggaaatcggggaggcggtcgga
accatcgcagctcagtcgatcggacaaccgggaactcagttgacgatgagaacgttccac
atcggtggtgcggcgtcggcaaaggttcaggaaaaagaacataaggtttcttatacggcg
atcgtaaacaatatcaacggacgtttgctccgcaatgataaagagcagaatttattctct
cgtcgcggatccatcgtaatccagagattgattcaacaatacaaggtggaagaactttcc
aacttaagagttgaaaacggtcagaaggtggataaaggagagttggtagcaactgccccg
agcggtgagaacatcacttccgaaatgccgggaaccattcatattgagaatggggttttt
cgtatcttgggagaagaggcagtgattccggtaaaaaccggaaccgtcgtaaacgtaaaa
gtaaacgatatcactcagccgaaccagccgatcgcggaatttgacccttacaacgaggta
ggtatttccgagttcgaaggtagcatccagtggatggatcttgagatcggaaaaaacgtt
agaagagacgaggacgtgaaaacttccaacattcttctgaaagtaatcgagcaaagaaga
gaaaaactcaacccgagaatcgcggttgtatccggaagttcgagagaagaatattcggtt
ccagtggatgctcttatctccgttcaagacggagacaaggtaagagccggagacattctt
ttcaaaattccaacggtagccgaaaaaactcgggatattaccgggggacttccaagggtg
gacgagcttttcgaagcgagaagacctaaggatgccacaactcttgccgaaaccgatggt
agaatcgagatcagcggtgagatcgtaaaagaaaaacggattctttatatccatccggac
aatccggatcaggaaaaagtaaaagttgcgattccgattggaaaacagattcgggttcgt
aacggagacttcgtgaagagaggggatcaaatcgacgatggaaatctggatcctcacgac
attcttcgcgtaaaaggtgttaccgcgcttcaagtgtatctcgttcaggaagtccaagaa
gtctaccgactgcaaggggttcatatcaacgataagcacatcgaagttgtggtaagacaa
atgttgagaaaagttttgattaccgattccggagacaccggttttgtaaatcagcaacaa
atcgatcgtcttgtgtttaacgaagaaaacagaagagtcgtcgccgaaggtggttctcct
gcggattcggttccgattcttctcggacttacaaaagcgtccttgaatacggaatcattc
ttctccgcggcttccttccaagaaactacgaaggttcttacggacgctgcgattaaagga
aaaaccgacaacctgatgggtcttaaagagaacgtcatcatcggtcacatgattcctgcg
ggaaccggaacgaagaagtataaagatatcgcggtattcaaatctacttacggagatttg
gaccgtccgttggaaatagaagaggaagaagaaattcctcaagcgatcgcagaagaatcg
gacgctgacggagacgaataa
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