Leptospira gorisiae: AB3N59_14910
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Entry
AB3N59_14910 CDS
T10747
Symbol
cas12a
Name
(GenBank) type V CRISPR-associated protein Cas12a/Cpf1
Organism
lgor Leptospira gorisiae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RuvC_1
REC1
NUC
cas_Cpf1_2nd
Motif
Other DBs
NCBI-ProteinID:
XDD49671
UniProt:
A0ACH2FQG5
LinkDB
All DBs
Position
1:3342788..3347503
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AA seq
1571 aa
AA seq
DB search
MKSKSIWDHFTKKYPVTKTLRFELIPQGRTEENIINKQIIRSEWIDEKNVPQGTDSERAR
DYGIVKKLLNQLHSLFIEQALSPENVKDFEKENKKSKTFKAWNDLLTAHFENWNQYNHDK
NDANSKSLEKSKKNLYIKLGNLLDFKGNLWKAEFANYHKVKNPDNNKIKLSASKVKILFG
NTSDPIQLLKYHIELGKIKLQKENKSEYSKDELMKILFTFEKFGTYFSGFNQNRANVYNM
DGKISSSIAYRLFNQNIEFFFQNIKRWEQFQNSINHKETKDNLKLTQGGDIQSKLKELNQ
NLVQPRFGFKLERLFTPGSFVYLFNQEGIDAFNIVLGGIPAEVRIAKIQGFNELINLTRQ
KLNEDKKSFPSLQILYKQILSKKKTDFIDQYEDDREMLAEIQEFSNSWNEKKKRITQSGE
EIVENSIEFIQREFNESFTSLDKAIHFSLKEDFYLSEKSIQDLSIDILGGYNTVHSLWYT
EVDGMRRNDGKPFNQSEKEKLKNQKYISFTQIEKLITAHSNQYIELKSNDAQDQSVYKEK
WKEIFKNEFKMSEYAKEKLRELIADGEKFKKNKNEKEIIIEIPSILISYQNQTLSACLES
KSLGTNKKEVVVLIKEYLDACLKLSKFVESFLINSRDLKENQSLDGSSDFQNTLLKWVQE
EFDVALIYNKVRNFVTKKPGSVDKIKINFDNATLLDGWDLNKEADNYGFLLKKDNNFYLG
VADSSFNQNLKYFNEEERLKEIEKIRKNIEKEENKKADKIDKEEIKKLKEELSDFELISN
LENGKFSKVKYKFMPVVAKMIPKCSTQLKEVQEHFKSSSKDIKISKNFVKPLIISKEIFE
LNNSVYDKELKKFISKIEDDEENKEDDNTQEARGPKKFQKGYYVTTGDKKGYKSALKTWM
SFCLEFTKSYDSCQIFDYSSLKKVSEYNSLNEFYKDLNGIGYTIDFVDISEEYINKKVNE
GELFLFQIYNKDFSEYSKGKENLHTTYWKLLFEPKNLKDVVIKLNGQAEVFFRPASIHEK
DRTVHLKNQKIENKNPNATKKSSIFDYDIIKDNRFTKNKFLFHCPITLNFKADGNPYINN
DVQENVAKNPEVNIIGVDRGEKHLLYYTVINQAGKILESGSWNTIRSEYKNKNQQTVSFE
TPYHKILDKKESERKDARESWQEIENIKELKAGYLSHVVHQLSNLIIKYDAIVILEDLNK
GFKRGRFKVEKQIYQKFEKSLIEKLNYLVFKDRRESDDPGHHLNAYQLTNKFISFERLGK
QSGILFYTTASYTSKVDPVTGFMQNIYDPYHKYKTRELFRNFTKISYNGFFFEFTYDLNQ
VKPDSDERRYKTNWTISSCVIRSEYDANSKTQKIYDVNDRLLKLFKSEKIKFENGDDLKE
SISKQDDKFIRDLHFYFMAIQKMRVVDPKIEKGEDSNDYIQSPVYPFYCSKNVQQNKRGL
YELPSNGDANGAYNIARKGIIIVDKIRLRIQIERLLEDEEIKVEWNKIANGFSKVKDKQA
IIAVFEEWAELTYQGKVQYNDLFAKKITEKGEKFIQFISSLSVTKEDWEIYTRNETVVQE
QIKIWNNQNST
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaatccatttgggaccattttaccaaaaaatatcccgtaactaaaacgctt
cgatttgaattgattccgcaaggcagaacggaagagaatattataaataagcaaattatt
agatctgaatggatagatgaaaaaaacgttcctcaagggactgattcggaaagggcaagg
gattatggaattgttaaaaaactattaaaccaacttcatagcctatttatcgaacaagca
ctttctcctgaaaatgtaaaggattttgaaaaagagaataagaagagcaagacattcaaa
gcatggaatgatctgctgacagcccattttgaaaactggaaccagtacaatcatgacaaa
aatgatgctaattctaaatctttagaaaaatctaaaaagaacctatatatcaaactagga
aatttacttgattttaagggaaacctatggaaggcagaatttgctaattatcataaagtc
aaaaatccagataacaataaaattaaattatcagcaagtaaagtaaaaattctctttgga
aatacttctgatccgattcaattactaaagtatcatattgaacttggaaagataaaactt
caaaaagagaacaagtcagaatattccaaagatgagttaatgaaaattcttttcactttc
gaaaaatttggaacttatttttccgggttcaatcaaaatcgagcgaacgtctataatatg
gatggcaaaatttcatcctcaattgcttatcgattattcaatcaaaatattgagttcttc
tttcaaaatataaaaaggtgggaacaatttcaaaactctatcaaccataaagaaaccaag
gacaatttgaaattaacccaaggaggagatattcaatcaaagttaaaagaactaaatcaa
aatttagtccaaccaagatttggtttcaaactcgaaagattgttcactcccggatctttt
gtatatcttttcaatcaggaagggattgatgcattcaacattgtattgggtggaattcca
gcagaagtaaggatagcaaagatacaagggttcaacgaactgattaacctaacaagacag
aaactaaatgaagataaaaaaagttttccttcattgcagatcctatacaaacaaatccta
agcaaaaagaaaaccgacttcattgatcagtatgaagatgatagagaaatgttagctgaa
atccaggaatttagtaatagctggaatgagaaaaagaagagaattacacaatctggtgaa
gaaatagtcgaaaattccattgaatttatccagagagaattcaatgaaagtttcacttct
ttggataaagccattcatttcagcttaaaagaagatttttatcttagcgagaaatcgatt
caagatctatcaattgatatcttaggaggttataatacagttcacagcctttggtatact
gaagtcgatggaatgcgaagaaacgatggaaaaccattcaatcaatctgaaaaagaaaaa
ctcaaaaatcaaaaatatatctcgtttactcaaattgaaaaactgatcaccgcacactct
aaccaatacatagaattaaaatcaaacgatgctcaggatcaatctgtgtataaagaaaaa
tggaaagaaatctttaaaaatgaattcaaaatgtctgaatacgctaaagagaagttgaga
gaactaattgctgatggagaaaagttcaaaaagaataaaaacgagaaagaaatcataatt
gaaatcccaagcatactgattagttatcaaaatcaaactcttagtgcatgtttagaaagc
aagtctcttggaaccaacaaaaaagaagtcgttgtattgattaaagaatacttagatgca
tgtttaaaattatctaaatttgtagagtcattcttaatcaattccagagatctaaaagaa
aaccagtcattggatggaagtagtgatttccagaatacacttttgaaatgggtccaagaa
gagttcgatgttgctttaatctacaataaagtaagaaactttgtcacgaaaaagccagga
agcgttgataaaatcaaaatcaactttgacaatgcaactttgttagatggttgggatcta
aataaagaggctgataactatggttttctacttaagaaagacaataacttttatttagga
gtagccgatagtagtttcaatcagaatttaaaatatttcaatgaagaagagagattgaag
gaaattgaaaaaattagaaaaaatatagagaaagaggagaataaaaaggctgataaaatt
gacaaagaggagattaaaaaacttaaagaggagctcagtgattttgaactgatttccaat
ttggagaatggaaaattctctaaagtgaaatataaatttatgcctgtcgtagcaaaaatg
attccaaagtgtagcacacaacttaaggaagttcaagaacatttcaaaagcagctcgaaa
gatatcaagatttcaaaaaattttgtaaaaccgctcattatttccaaggaaattttcgaa
ttaaataattctgtttatgataaagagttaaaaaaattcatttcaaaaatcgaagatgat
gaagaaaataaagaagatgataatactcaggaagccagggggcccaaaaaattccaaaaa
ggatactatgtaacaactggtgataaaaaaggttacaaatctgccttaaaaacttggatg
agtttttgtcttgaatttactaaatcctacgatagctgtcagatatttgattattcctcg
ctaaaaaaagtatccgaatacaattcattaaatgaattttataaagatttaaatgggatt
ggatatacaatcgattttgtagatatttcagaagaatacataaataaaaaagtaaatgag
ggggagctatttctattccaaatttataacaaggatttttctgagtattctaaaggaaaa
gaaaatctgcataccacttattggaaacttttgtttgagcctaaaaacctaaaagatgtt
gtaattaaactaaatggccaagcggaagttttttttcgccctgcctccattcatgaaaaa
gatagaaccgttcatttaaaaaaccaaaagattgaaaataagaatccaaatgcaactaag
aaaagtagtatattcgattatgatataataaaggacaatcgatttactaaaaacaaattc
ttatttcattgcccaatcactctaaattttaaagcagatggaaatccatatataaacaat
gatgttcaggaaaatgtagcaaagaaccccgaagtgaatatcattggagtagatagaggg
gaaaaacaccttctctattataccgttatcaatcaggcaggaaaaatcttagaatcggga
agctggaatacgattcggtctgaatacaagaataaaaaccaacaaaccgtgtcttttgaa
acaccttaccataagatcttggataaaaaagaatcagaaagaaaagatgccagagaatcc
tggcaagagatagaaaatatcaaagagctcaaggccggttatttgtctcacgtagtccat
cagttgtccaatctaattattaaatacgatgccattgtgattcttgaagatttgaataaa
ggatttaaaagaggaagatttaaagtagaaaaacaaatatatcaaaaatttgaaaagtct
ttgatagagaaattaaactacttggttttcaaagatcgtagagagtcagatgatcctggt
catcatttaaacgcctaccaattgacaaataagtttataagttttgagagattgggcaaa
caatctgggatcttattttatacaaccgcaagttatacatctaaagtggatcctgttact
ggcttcatgcagaatatttacgatccataccataagtacaaaacacgtgaactttttaga
aattttaccaagatttcttataatggatttttttttgaattcacctatgatttaaatcaa
gtaaaaccagattcagatgaaagaagatataagactaattggacgatatccagttgcgtc
atacgttctgagtatgatgcaaattctaaaactcaaaaaatctatgatgtaaatgataga
ctattgaaattattcaaatcagaaaaaataaaatttgagaatggagacgatttaaaagag
agcatttcaaaacaagatgataaatttatccgagaccttcatttttacttcatggcaata
caaaagatgagagttgtagatccaaaaatagaaaagggagaagactccaacgattacatt
caatcgcctgtttatcctttttattgctccaagaatgttcaacagaacaagcggggactt
tatgaacttccgagcaatggagacgccaacggagcttacaacattgctcgaaaaggaatc
attatagtggacaagattcgtttacggatccaaattgaaagacttctcgaagatgaagag
attaaagttgaatggaacaaaatcgccaacggtttttcaaaagtaaaagataaacaagcg
ataattgctgtttttgaagagtgggctgaactaacataccaaggaaaggttcagtacaat
gacttgttcgcaaagaaaattactgaaaagggtgagaaatttatccaattcatatcaagt
ctcagcgtgacaaaagaagattgggaaatttatacccgaaatgaaacggtagtacaagag
caaataaagatttggaacaatcagaattccacctaa
DBGET
integrated database retrieval system
