Leptospira gorisiae: AB3N59_16100
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Entry
AB3N59_16100 CDS
T10747
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lgor Leptospira gorisiae
Brite
KEGG Orthology (KO) [BR:
lgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgor03009
]
AB3N59_16100 (rlmD)
Enzymes [BR:
lgor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AB3N59_16100 (rlmD)
Ribosome biogenesis [BR:
lgor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB3N59_16100 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
N6_N4_Mtase
Methyltransf_4
PrpR_N
UPF0020
FtsJ
TehB
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XDD49869
LinkDB
All DBs
Position
1:complement(3597158..3598339)
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AA seq
393 aa
AA seq
DB search
MKPPASQSCQHYPECAGCDRLHIGYEKQLQHKQEEIATLLGGFKGLEILPIVKSPKEQMY
RHKVQLPFGHRKIGKRSVLTLGLHNKENTFIIDQKECRIQDRDLTTVAFAIRHWARTENL
SPYNEKNGSGLLRHIVLRKANASQEILVGIVTNTNEIPGRKNITNSLQSYIKQFLSKEKS
KAEVVGILQNVNQRNTKVVLGEKETTWYGRHFIKEKIGELNFQIGLSTFFQVNPYQIENL
YSLVVQDLPSDSIVVDAYCGIGTISLYVAAKSKKVIGLEENPNSIRSAIGAAKANGIENV
VFTRGKVLQSLQSALNEKPDVVIVDPPREGLDSETKKILLNSKIGKILYVSCNPETLRRD
SVELTKSFRYQKVTPVDLFPHTSHLESVSVFVR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcccgcgagtcaatcctgccaacactatcctgaatgtgcgggatgtgatcgt
ttgcatatcggatacgaaaaacaactccagcacaaacaggaagaaatcgcaacactgctt
ggaggttttaagggattggaaattcttccgatcgtaaaaagtccgaaggagcagatgtat
cgtcataaggttcaacttcctttcggacatcgtaagatcggcaaaagatcggtactcact
ctcgggctgcacaataaggaaaacacatttatcatcgatcaaaaggaatgtagaattcag
gatcgggatcttaccaccgtagcttttgcgattcggcattgggcgcgaaccgaaaaccta
agcccatacaatgaaaaaaacggaagtggtcttctcagacatattgttttgagaaaagcc
aacgcgtcccaggaaattctggtggggatcgtaaccaacacgaacgaaattccgggaaga
aaaaatataaccaatagtttgcagtcgtatatcaaacaattcttaagtaaggaaaaatcg
aaagcggaagtcgtcggaattctgcaaaacgtaaatcaaagaaacacaaaggttgtgctt
ggagaaaaagagacgacctggtatggaaggcattttattaaagaaaaaataggagagctc
aattttcaaatcggtctttccacattctttcaagtcaacccgtatcaaatcgaaaatcta
tacagcttggtcgtccaagatctgccttcggattcgattgtagtggatgcgtattgcggg
atcggaaccatttctctgtatgttgctgcaaaatcgaaaaaagtgatcggtttggaggaa
aatccgaattccatccgatccgcgatcggtgccgcaaaggccaatggaatcgaaaacgtt
gtttttaccaggggaaaagttttacagtctcttcagtccgcgttgaatgaaaaaccggat
gtcgtgatcgtggatcctccccgcgagggactggattcggaaacaaaaaagatattatta
aattctaaaataggaaagattctttacgtttcctgcaatccggaaacgctgagaagagat
tccgtcgaactcacaaaatcgtttcgatatcaaaaggtgacgccggtggatttatttccg
catacgagtcatttggaaagtgtttcggttttcgtgcgttaa
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