Lactococcus garvieae ATCC 49156: LCGT_0144
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Entry
LCGT_0144 CDS
T01618
Name
(GenBank) ribosomal large subunit pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgr03009
]
LCGT_0144
Enzymes [BR:
lgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LCGT_0144
Ribosome biogenesis [BR:
lgr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCGT_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
DUF1410
Motif
Other DBs
NCBI-ProteinID:
BAK57657
LinkDB
All DBs
Position
complement(150283..151119)
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AA seq
278 aa
AA seq
DB search
MKFSLILPKKIKKQSVSHLLEHTWLIPRKQRHLLRTKKHVFLNGTLANWEESVKPQDEVT
LIFDDEDFKQLEVPAGNPQLADILYEDEHLVIVNKPEGMKTHGNTAEEIALQNHVAARLN
LPVYVVHRLDKETSGAVLFAKNQFILPILGQMFEENKIHRSYLAVIQGYFNEKSLTLNKN
IGRDRHDRKKYVTNKNGKRAITHVSVLKKGHNYSLVSCTLDTGRTHQIRVHLYSEGHPII
GDPLYNSPIKKQRMMLHAEKLYFIHPFTQELIEITAPS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtttaattttaccaaaaaaaattaaaaagcaaagtgtttcgcatttactg
gagcacacttggctcattccgcgcaagcaaagacaccttttacgaaccaaaaagcatgtc
tttcttaatggtactttggcaaactgggaagaatctgtaaagccccaggacgaagttacc
cttatttttgatgacgaggatttcaagcaactggaggttcccgcaggcaaccctcaactt
gccgatatcctgtatgaagatgaacaccttgtgattgtaaataaacccgaaggtatgaaa
actcatggtaatacagctgaagaaatagccctacaaaatcacgtggcagctcgtctgaac
ctccccgtatatgtcgttcatcgcttggacaaggaaacttctggagcagtcctctttgcc
aagaaccaatttattctgcccattcttggtcaaatgtttgaggaaaataaaatccatcgc
tcttatttggcagttatacaaggctattttaacgaaaaaagcttaactcttaataaaaat
attggaagagatcgtcacgatcgaaaaaaatatgtcacaaataaaaacgggaaacgagcc
attacacatgtgtctgtcctcaaaaaagggcacaactactcgcttgtgagctgcactctt
gataccggccgcacgcaccaaatacgggtccatctttacagtgaaggacatcctattatt
ggtgatccgctctataattcaccgataaaaaaacagcgcatgatgcttcatgcagaaaaa
ttatatttcattcatcccttcacacaggaattaatagaaattacagcacctagctaa
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