Lactococcus garvieae ATCC 49156: LCGT_0327
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Entry
LCGT_0327 CDS
T01618
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgr03032
]
LCGT_0327
03036 Chromosome and associated proteins [BR:
lgr03036
]
LCGT_0327
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0327
DNA replication proteins [BR:
lgr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LCGT_0327
Chromosome and associated proteins [BR:
lgr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LCGT_0327
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LCGT_0327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BAK57840
LinkDB
All DBs
Position
334751..335026
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQDLIAEVAAKAGLTKKDAEKAVNAFGESVTEFLAKGEKVQLIGFGTFETRERAARE
GRNPQTGAAIQIAATTVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagatcttattgctgaagttgcagcaaaagctggattgactaaaaaa
gatgctgaaaaagcagtgaacgctttcggtgaatcagtaactgaattcctcgcaaaagga
gaaaaagttcaacttatcggtttcggtactttcgaaactcgtgaacgtgcagctcgcgaa
ggacgcaacccacaaactggtgcagctatccaaatcgcagcaactacagttcctgcattt
aaagctggtaaagctttgaaagacgctgttaaataa
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