Lactococcus garvieae ATCC 49156: LCGT_0345
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Entry
LCGT_0345 CDS
T01618
Name
(GenBank) metal-dependent hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgr03016
]
LCGT_0345
Enzymes [BR:
lgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LCGT_0345
Transfer RNA biogenesis [BR:
lgr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LCGT_0345
Prokaryotic type
LCGT_0345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
RraA-like
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAK57858
LinkDB
All DBs
Position
350530..351462
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AA seq
310 aa
AA seq
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MDIQFLGTGAGQPSRTRKTQAIALKLLDERNEIWLFDCGEATQHQILETSIKPRKITKIF
ITHLHGDHIFGLPGFLSSRSFQGSSKDEEHTDLELYGPKGLKDFVMTALRMSGSRLGYKI
HFHEIETPGKIFEDQTFEVYADTLDHTIFCLGYRVVEKDRPGELDAAALKAAGLPFGPLF
GKIKNGETVEYDGKVFHPEDYIGADKQGKVVTILGDTRRTPNAVRLAVGADLLVHEATYE
AKESRMARRHGHSTSKQAADVAQEAGVKRLVLTHISARYVGPLVAQLAQEARAVHPNSYV
AKDFYEEKVE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaatttttaggaacgggcgcaggccagccctcgcgaacgcgaaaaacacaa
gctattgctttgaagttactcgatgaacgtaacgaaatatggctatttgattgtggcgaa
gcgacccagcatcaaattttggaaacgtcaattaaaccaagaaaaattaccaagattttt
attacacatttgcatggcgatcatatttttggtctaccgggttttctatcgagtcgttct
ttccagggttcaagtaaagatgaggaacatacagacttggaattatatgggccaaaaggt
ctgaaggattttgtgatgacagctctgcgcatgtcgggctcgcgcctaggctacaagatt
cattttcatgaaattgaaacaccgggtaagatttttgaagatcaaacctttgaagtatac
gcggataccttagatcatacaattttttgcctaggctatcgcgtggttgaaaaagatcgt
cccggagaattagatgcagcagctttgaaagcagcaggactccctttcggaccactcttt
ggcaaaataaagaatggtgaaacagtagaatatgatgggaaggtctttcatccagaggac
tatatcggcgcagacaagcaggggaaagtggtaaccattcttggagatacccgtcgtacc
ccaaacgctgttcgtttagccgttggtgcagatcttttagttcatgaagcaacttatgaa
gcaaaagagtcaagaatggcccgccgacatggacattcgacctcaaaacaagcagcagat
gttgctcaggaagccggcgtaaaacgcttggtgctcacgcatatcagtgcacgctatgtt
ggcccactcgtggctcagcttgcgcaagaagcacgcgctgttcatcctaattcctatgtg
gcgaaagatttttatgaagaaaaagttgagtaa
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