Lactococcus garvieae ATCC 49156: LCGT_0456
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Entry
LCGT_0456 CDS
T01618
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCGT_0456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0456
Enzymes [BR:
lgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LCGT_0456
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCGT_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
UvrD_C
HHH
UvrD-helicase
IMS_HHH
Herpes_Helicase
RecR_HhH
nSTAND3
AAA_12
AAA_28
RsgA_GTPase
NPHP3_N
AAA_16
AAA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAK57969
LinkDB
All DBs
Position
471013..473451
Genome browser
AA seq
812 aa
AA seq
DB search
MTEKIYFTGTIEAIFFSNPSNFYKVLLLEVDDTNSAYEDYEIVVTGTIGELIEGDSYTFY
GKLTTHPKYGEQLQVETYEKAVPTSAAGLIKYFSSDKFPGIGKKTAERIVALFPDDTVDS
ILSKPEELDSILPLAKRNSFIKRLRDNHGVEKILSKLAEYGIPSKLQFQIHELYKDQTLD
IIAKNPYQLVEDIKGIGFKTADQIAQELGIAADSSDRFRAGLMHVVKTQPLITGDTYIEA
RDLLQQTIQLLEEARQIEVSPETVAEEINHLLEDGKMQQEETKIFENSLYFAEQGISEYL
KKLIGRSTQTFSDEKILKNIEQVETKLGIRYDKLQKEAIFQALNSQFFILTGGPGTGKTT
IINGFIETYAQLHDIDLDPGHYHDDVFPILLAAPTGRASRRMNELTGLPAATLHRHLGLN
TDEAMDMESNDLAGSLLIVDEFSMVDTWLANKLLQAIPPSMKVLFVGDADQLPSVGSGQV
FADLLKLPEIPSVRLDKIFRQGAESTIIDLAHEIKEGHLPQDFTSRHPDRSYFEAGPGQV
APLVTQVATAWKKRGNNPFELQILAPMYKGVAGINTLNGLLQELFNPLDERQEFNYQDIH
FREEDKVLHLVNDAENNVFNGDLGRIVELIPAKHTESKQDEIVMDFDGQEVSYPRAEWYK
ITLAYAMSIHKSQGSEFSTVVVPMVSSYSRMLERNLLYTAITRAKQSLILIGEQKAFAQA
VQKESANRKTFLKERFTGKSEPGEKLKHTLDADNETTGQVSPPRTEEISLFPEENVTSTS
YATEPFLTADLVNSGDFDPLIGLTAADFAIFK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaaatatattttaccggaacaattgaagcgattttctttagtaaccctagt
aatttttataaagtacttttactagaagtggatgacaccaatagcgcttatgaagattac
gaaattgttgtaaccggaacaattggggagctgatagaaggagacagttatactttctat
ggtaagcttacgacacatcccaaatatggggagcagcttcaagttgaaacttatgaaaaa
gctgtgccgaccagtgctgctggactaatcaaatacttttcttctgataaatttccgggt
attggtaaaaagacggcagaaagaattgtggctctttttcccgacgataccgttgacagt
atcttaagtaagccggaagaactggacagtattcttcctttagcaaagagaaattccttt
atcaaaagactacgtgacaatcacggtgtggaaaagattttatcaaagcttgcggaatat
ggtattcccagtaagctccaatttcaaattcatgagctttacaaagatcaaaccttggat
attatcgccaagaatccataccagttggttgaagatatcaaaggcatcggctttaaaaca
gccgaccaaattgctcaagagttaggaattgcagccgatagtagtgaccgttttagagcg
ggactgatgcatgtggttaaaacacagcctttaattacgggcgacacctatattgaagcg
cgtgatcttttgcagcaaaccatccagctcttggaagaagcgcgtcagatagaagttagc
ccagaaactgtggctgaagaaatcaaccatctgcttgaagatggtaagatgcaacaagaa
gagactaaaatatttgaaaattccctttattttgctgagcaaggcattagtgaatacctc
aaaaaacttattggacgcagtactcagaccttctcagatgagaaaatcttgaaaaatatt
gaacaagtagaaaccaagctaggtattcgctacgataaactgcagaaagaagctattttt
caagctttaaatagtcagttcttcattttaacgggtggaccaggaacaggtaaaaccacg
attatcaacggttttatcgaaacttatgcacaacttcatgacattgatttagatcctggg
cattatcatgatgatgttttccccattctgctggcagcaccaacaggaagagcgagtcgc
cggatgaatgaacttaccggcttaccagcagcaacgctccatcgtcatttaggtttaaat
actgatgaagcaatggatatggaaagtaatgatcttgcgggttcacttttgattgtagat
gaattttcaatggtagatacctggttggccaataaacttttacaagccattcctccttcc
atgaaggtgctctttgtaggtgatgcggatcagctgccatcagttggttctgggcaagtc
tttgcagacttgctgaagcttccagagattccttcagttcgcttagataaaattttccgt
caaggcgctgaatcaacgattattgatcttgcccatgaaatcaaggaaggacatttgcca
caagactttaccagtcgtcatcccgatcgttcttattttgaagctggaccgggacaagtt
gctcctcttgtgacacaagtggcaaccgcgtggaaaaaaagaggaaataatcctttcgaa
ttgcagattttagcaccgatgtataaaggtgtagctggtataaataccttaaatggctta
ttgcaagaattgttcaatccgcttgatgagcgacaagagtttaactatcaggatattcat
tttcgtgaggaggacaaagttctccatttggtcaatgatgcagaaaacaatgttttcaat
ggtgacttaggaagaattgttgaactcattccagcaaaacatacagaaagcaaacaagac
gaaattgtgatggattttgatggtcaagaagtgagctatcctcgcgcagaatggtataaa
atcactttggcttacgcgatgtctattcacaagtcacaggggagtgagttttcaacagtt
gtggttccaatggtttcttcctattcaaggatgttggaacgtaatctcttgtatacagct
attacgcgagccaaacaaagtctaattcttattggagaacaaaaagcctttgcccaagct
gtgcaaaaggaaagtgccaatcgaaaaactttcttgaaagagcgatttacagggaaatca
gagcctggcgaaaaactaaagcatactttggatgcggacaacgaaacaaccgggcaagtg
agtcccccgcgaacagaggaaatttcgctttttcctgaagaaaatgttacgtcgacatcc
tatgcgacggagccttttttaacagcggatttggttaattctggtgattttgatccattg
attgggcttacggcagctgattttgcgatttttaaataa
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