Lactococcus garvieae ATCC 49156: LCGT_0461
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Entry
LCGT_0461 CDS
T01618
Name
(GenBank) uracil-DNA glycosilase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCGT_0461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0461
Enzymes [BR:
lgr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCGT_0461
DNA repair and recombination proteins [BR:
lgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCGT_0461
Prokaryotic type
LCGT_0461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF7187
Motif
Other DBs
NCBI-ProteinID:
BAK57974
LinkDB
All DBs
Position
475890..476549
Genome browser
AA seq
219 aa
AA seq
DB search
MKKTDWSGPLRERLPQEYFSDLVDFINEVYAKGNVYPPEDKIFRAIELTALSDVKVILVG
QDPYPQPGKAQGLSFSYPASFVVNRPDSIVNIRKELQSEGFDKKDSDLTHWAEQGVLLLN
AVLTVPEMKCNAHKGKIWEPLTDEIIKIASDDARPKVFLLWGGDARKKAKLIDSSKHLVL
ESAHPSPLSASRGFFGSQPFSKANAFLEKTGQKGIDWSK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagattggagtggccctttaagagaacgattgcctcaagaatacttttca
gatctcgttgattttattaatgaagtttatgctaaaggtaatgtttatccacctgaggat
aaaatatttcgggcgattgaattgaccgccttgtctgatgttaaagttatactggttggg
caggatccttatccacagccaggcaaagcccaagggcttagtttttcctatcctgcttcc
tttgtggtgaatcggccagactctattgttaatattcggaaagaactccaaagcgaaggc
tttgataaaaaggattcagatttaacacattgggctgagcaaggggttttattgctcaat
gctgtacttaccgtccccgagatgaagtgtaatgcgcataaaggaaaaatctgggaaccc
ttgacagatgagataataaaaattgcttcggatgacgcacgcccaaaagtctttctctta
tggggcggtgatgcgcgtaagaaagcaaagctgattgattcttctaagcatttagtactc
gagtctgcacatccttcgcctctttctgcctctcgtggcttctttggctcacagcctttt
tcgaaagccaatgcctttttagaaaaaacaggacaaaaagggatagattggtcaaaataa
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integrated database retrieval system
