Lactococcus garvieae ATCC 49156: LCGT_0568
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Entry
LCGT_0568 CDS
T01618
Name
(GenBank) exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCGT_0568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0568
Enzymes [BR:
lgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LCGT_0568
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LCGT_0568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nup49_C
DUF6687
Motif
Other DBs
NCBI-ProteinID:
BAK58081
LinkDB
All DBs
Position
588277..588501
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AA seq
74 aa
AA seq
DB search
MATKKEAKFEENLAELETIVKKLESGDVALEDAISEFQKGMLLSEKLKTTLNEAEKTLVK
IVGKDGSESEFLGE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaaaaagaagcaaaatttgaagaaaatttagcagaactcgaaacaatcgta
aaaaaactagaaagcggagatgtggctttagaagatgcaatctctgaatttcaaaaagga
atgctcctttctgaaaaactcaaaacaacattaaatgaagccgagaaaacacttgtaaaa
atcgtcggaaaagacggatccgaaagtgaatttttaggagaataa
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