Lactococcus garvieae ATCC 49156: LCGT_0752
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Entry
LCGT_0752 CDS
T01618
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgr03019
]
LCGT_0752
Messenger RNA biogenesis [BR:
lgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LCGT_0752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
nSTAND3
GlnE
Motif
Other DBs
NCBI-ProteinID:
BAK58265
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All DBs
Position
775701..776591
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AA seq
296 aa
AA seq
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MDNKLNIVIITGMSGAGKTVAIQSFEDMGYFAVDNMPPNLIEKFVELLNTPDSKINKVAM
VVDMRSRIFFDRLRGIVAELSNLPEVNFKLLFLDASDVELVARYKETRRSHPLAIDGRVL
DGITQEREILSDLKALAEVVIDTSELTPRNLRARILERFSETKEAPFRIEVISFGFKYGL
PMDADLVFDVRFLPNPHYIPELRDKTGQDKEVFNYVMNQEASEDFYKNLMHMLLPIIPAY
QKEGKSVLTIAFGCTGGQHRSVAFAERVSKALLKEDWHLNTSHRDKDRRKETVNRS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaactgaatattgtcattattactgggatgtcaggtgcaggtaaaactgta
gccattcaatcttttgaagacatgggctactttgccgtcgacaatatgccacctaacttg
attgaaaaatttgttgagcttctcaatacacccgacagtaaaataaacaaagttgcaatg
gttgtggacatgcgatcacgtatcttctttgaccgtttacgcggtatcgttgcagaactt
tcaaatctaccagaagtgaattttaagcttttattccttgatgcaagtgatgttgagctg
gttgcacgatataaagaaacacgccgttcacatccattggctattgatggacgtgtattg
gatgggattacgcaagagcgcgaaatcctttcagatttgaaggccttggctgaagttgta
atcgatacaagtgaactcacaccgcgtaatttgagagcccgtatccttgagcgtttttca
gaaacaaaagaagcgccatttcgtatcgaagttatttcctttggctttaagtacggtttg
cctatggatgcagacttagtctttgatgtgcgtttcctaccaaatccacactatattcca
gaacttcgggataaaacagggcaagataaagaagtctttaactatgtcatgaatcaggaa
gcttctgaagatttttataaaaatttaatgcatatgctcttgccaattattcctgcttac
caaaaagaaggaaaatctgtattgacaattgcttttggctgtacaggaggccaacaccgt
tctgtcgcatttgctgaacgtgtatccaaagcacttcttaaagaagactggcatttaaat
actagccacagagataaggatagacggaaagaaacggttaatcgatcatga
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