Lactococcus garvieae ATCC 49156: LCGT_0802
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Entry
LCGT_0802 CDS
T01618
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_0802
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCGT_0802
Archaeal homologous recombinant proteins
LCGT_0802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
ABC_tran
AAA_21
HTH_41
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAK58315
LinkDB
All DBs
Position
826930..830067
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPIYLEMNYFGPHAHSEIDFRALDEAPLFLISGDTGAGKSTIFDAMTYALFDKTTGDRE
AREMRSQFAKPDQRTEVTFYFEQGNFLYKVQRCPEQEVFKKRGTGTKTEKSQARLAIVDK
VFGTEQASLATKPVDVASEIYGLLNLSAEQFKKIILLPQNDFSRFLKSATNEKEEILKKI
FGTAIFTVFSEEVRHQYTKNNQENAALDSILQSQYSSSVWTEEEAKTLDECPENEKFKKA
TEFLEQKQLQESNARDLARIAQQQVEAADKAYEEALLLEQEFLEAEKAQKEYQEKIVEQA
ALYEQQKKAYEARSWAQQFKDILRDLEEVEKEREANEVREAEYRLKAEQEQKTLGEVKKH
EQDLGQKASVFEEKDKAIEELTRTITQAEQAEKLIRQKKDFEKKIVHLQLQQRETDAPLK
EAQTKLEQLQKELLEEGVLQAEKDALSLLKLDFHQQLSPLAEYLERLKQENQGAQEDLNV
AEENITKLEQEFMLKQESYQEKRKLRQSLMIAQLQKELEDGLPCKVCGAIEHPLAQAKLD
VSDSDLKEAMQQVDKAQEAFAAAEERQEKAQSELERAQKKAAEKAEALQEKQQKFDQAYR
QFCQTHEGRFPEVFNRQELSNIFQAREDSYKQKSIAQEEGSLEKDKLCVLVEKIEAERQA
LVQESDKVKAQLETVVQSLAEFGQLQPSQTLKEQKVALRQEVDNYYTECQEVREKIVVLE
KRYAEQKAKHGERLTRIEEQKLKIQEGQGMIQKALAAPNAWTNDLATLKKWLSEDKLPEI
SKFINTYELEEKRLNRALAEYKEKLSDKQRPHLTKLREEKQALNARYSQTQKTVIELSNT
RQQLETTVAKIKQVLETQGKAADKAREIIKLYNAVAGKSGDKLKLETFVVQHYLEKVLIY
ANQHFINQLSNNRYRFELAKESANKRRDHGLDISIYDNETGASRSSNTLSGGETFIAALS
IALALSEVVQNSAQGVQIEALFVDEGFGSLDQETLQKAMTALEQIGENRLVGLISHVEEM
KDSIAQQLRVEKVGDGRSQVKLFSK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatttacttagaaatgaattattttgggcctcatgcacactctgagattgat
tttagggccttagatgaggcaccattatttttgattagcggggatacaggtgctggaaaa
tctacgatttttgatgcaatgacttatgctctttttgacaagacgacaggggatcgtgaa
gcgcgggagatgcgcagccaatttgcgaaacccgaccaacgtacagaagttactttctat
tttgagcagggaaactttctttataaagtacagcgttgtcccgagcaagaagtctttaag
aaaagaggaacagggactaagacggaaaaaagtcaagcccgcttagccattgtagataaa
gtatttggtacagagcaagccagcttggccacaaaaccggtcgatgttgccagtgaaatc
tatggccttttaaatctcagcgccgagcagttcaagaaaatcattttactgccacaaaat
gatttctcacgctttttaaaatccgctaccaatgaaaaagaagaaatcctgaagaaaatt
tttggtacagcaatttttacggtcttttccgaggaagtgcgtcatcaatatacaaaaaat
aatcaagaaaacgcagctcttgattcaatcttacaaagccagtatagctcttctgtctgg
acagaggaagaagccaagactttggatgaatgtccagagaatgaaaagtttaaaaaagcg
acagaatttctggagcaaaagcagctgcaagaaagcaatgctcgtgacttagcaagaata
gcgcagcaacaagtagaagccgctgataaagcctatgaagaagccttgcttctggagcag
gagttccttgaagcagaaaaggctcaaaaagaataccaggaaaaaattgtagaacaagca
gcgctttatgagcaacagaaaaaagcttacgaagcacgcagctgggcacaacaatttaag
gatattttgcgtgacttggaagaagttgaaaaagaacgagaagccaacgaagtgcgtgaa
gctgagtatcgcttaaaggccgagcaagagcagaaaacacttggagaagtgaaaaaacat
gagcaagacttaggtcagaaagcttcagtatttgaagaaaaagataaggcgattgaagag
ctgactcggacgattacgcaagccgagcaggcagaaaaacttatccgtcagaaaaaggac
tttgagaaaaagattgttcacttgcagcttcagcaaagggagacagatgcaccgcttaag
gaagcacaaaccaaacttgagcaattgcaaaaagagctccttgaggagggcgtcttgcag
gcggaaaaagatgccttgagccttctaaaattggactttcaccagcaactttctccctta
gcagaatatttggagcgcttaaaacaagaaaatcaaggagcccaagaagatttaaatgtt
gcggaggaaaacattaccaaactggagcaagagttcatgctcaaacaggaaagctatcag
gaaaagcgaaaattacgccaaagtctcatgattgctcaactgcaaaaggaacttgaagat
ggcttgccctgtaaagtttgtggtgctatagagcatcctttagcacaagctaagcttgat
gtttctgacagtgacttaaaagaagccatgcaacaagtggataaagctcaagaagccttt
gctgcagcagaagaaaggcaagaaaaggctcaaagcgaacttgaaagggctcaaaaaaag
gctgcagaaaaagctgaagcattgcaagaaaagcagcagaagtttgaccaagcttaccgt
cagttttgccagacacatgaaggccgttttcctgaagtttttaatcgccaagagctcagt
aacatttttcaagcaagagaagacagttataagcaaaaaagcattgcacaagaagaaggt
tctctggagaaagacaagctttgtgttttagtagaaaaaatagaagctgaacgtcaagca
cttgtacaggaaagcgataaagtcaaggcacagctcgaaacagtagttcaaagtttggct
gagtttgggcaactgcaacccagccaaactctaaaagagcagaaggtagcattgcgccaa
gaagttgacaactattacacggagtgccaagaggtacgcgagaagatagtggtccttgaa
aagcgttatgcagagcaaaaagcgaaacatggtgaacgtttgacgcgtattgaagagcaa
aagctgaagattcaagaaggacagggcatgattcaaaaagcattggcagcaccaaatgct
tggaccaatgatttggccacactgaaaaaatggctttcagaggataaattgcctgaaatt
tcgaagtttattaatacttatgaacttgaggaaaaacgcttgaatcgtgcattagctgag
tataaggagaaattaagtgataagcaaagacctcatcttacgaagttgagagaggaaaag
caagccttaaacgcacgctatagtcagacacaaaagacagttattgagctctccaataca
cgccagcaactcgaaacaactgttgctaagattaaacaagtacttgaaacacagggtaag
gcagcagataaggcgcgtgaaataatcaagctctacaatgcggtagcaggaaaatcagga
gataagctcaagcttgaaacctttgttgtccaacattatctagaaaaagttttgatttat
gctaaccagcatttcatcaatcaactttcaaataaccgttaccgctttgagttagccaaa
gaatccgccaataaaagacgtgatcatggcttagatatcagcatctatgataatgaaaca
ggcgcctcacgctcatccaatactttatccggtggagaaacctttattgccgctctgtca
atagcattggcactgagtgaagtggtacagaactctgcgcaaggggttcaaatagaagca
ctttttgtcgatgaagggtttggctcacttgaccaagaaacactccaaaaagccatgacg
gcactagaacaaataggagaaaaccgtcttgttggcctcatcagtcatgtagaagaaatg
aaagattctattgcacaacaactgcgtgtcgaaaaagtcggagacggacgaagtcaggta
aaactcttttcgaaataa
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