Lactococcus garvieae ATCC 49156: LCGT_1296
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Entry
LCGT_1296 CDS
T01618
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03030
DNA replication
lgr03430
Mismatch repair
lgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCGT_1296
03430 Mismatch repair
LCGT_1296
03440 Homologous recombination
LCGT_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgr03032
]
LCGT_1296
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_1296
Enzymes [BR:
lgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCGT_1296
DNA replication proteins [BR:
lgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCGT_1296
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCGT_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAK58809
LinkDB
All DBs
Position
complement(1297701..1298522)
Genome browser
AA seq
273 aa
AA seq
DB search
MEHYVVFDFETTGFSPQKNEIIQIGAVKYDQAHQEIARFNQLIKPTRSYLPTKISELTGI
WPASLLEQPVLAEVLPDFIAFSRDSLMVAHNAPFDVSFLYQAIVDCEIGDAPHFQVYDTL
SEAKKLVQMPNYKLETFKDVLGIDLRSHDALNDCLITARLYQYLQDLSRPPKPQLVSNES
LQMDLFGEVDTTITEEVRRKLSLPITKDLVYYRRDTQRNWQKFEVTGLAITAAYSTGYSL
TATLYNNETVTIHSDFLKEMQKANFTNEIEKEG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtggagcattacgtagtatttgactttgagacaacgggatttagtcctcaaaaaaatgag
attattcaaattggtgccgtcaaatatgaccaagcgcaccaagaaattgcgcgctttaat
cagttgatcaaacctacgcgttcttatcttccgactaaaatttcagaactgaccggtatt
tggccggcttccttactggaacaacctgttctggctgaagtactccctgattttattgct
ttttcaagggatagcttgatggtggctcataatgcgccttttgacgtcagcttcctttat
caggcgatagtggattgtgagattggcgatgcccctcattttcaagtctatgatacactg
tctgaagcaaaaaaattagtgcagatgcccaactataagttggaaaccttcaaggatgtt
ttaggcattgatttgcggagtcacgatgcccttaacgattgccttatcaccgcacgtctc
tatcagtacttgcaagacttgtcacggccacccaaaccgcaactggtgtccaatgaaagt
ttgcaaatggatttgtttggcgaggtggacacgaccatcacagaagaagtacgtcgaaaa
ttgagtttaccgattaccaaagacttagtctattatcgcagagatacacagcgaaattgg
caaaaattcgaggtgacaggcctagcaataacggcagcttattcaacaggctatagctta
acggccacactttataataatgagacagtgaccattcattctgactttttgaaggaaatg
cagaaagctaactttacaaatgaaatagaaaaagagggataa
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