Lactococcus garvieae ATCC 49156: LCGT_1342
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Entry
LCGT_1342 CDS
T01618
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgr03009
]
LCGT_1342
Enzymes [BR:
lgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LCGT_1342
Ribosome biogenesis [BR:
lgr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCGT_1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
BAK58855
LinkDB
All DBs
Position
complement(1342350..1342883)
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AA seq
177 aa
AA seq
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MILLFNKPFDVLTKFTDAENRKTLKDYIDIPNVYAAGRLDKDSEGLLLLTDDGKLNHKLT
DPKSKSYKTYLVQVEGEFTEAAAQKLRAGVLLKDGKTLPAKVRRVSEPEWLWERTPPIRE
RKSIPTSWVEISIKEGKNRQVRRMTAHVGFPTLRLIRTKIGNYELGNLPSGKYKIIK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgatattactatttaataaaccctttgacgtactcacaaaatttactgatgctgaaaat
cgtaaaacactaaaagattatattgatatacctaatgtatatgcagctggccgactcgat
aaggacagtgaaggcttacttttactgacagatgatggaaagttaaaccataagctaacg
gatccaaaatccaagtcttacaagacttatcttgtacaggtggagggagaattcactgag
gcagcagcgcaaaaactccgtgcaggtgttttgcttaaagatggtaaaacacttccggcg
aaagtaagacgtgtttcagaaccagagtggctctgggagagaacgccacctattcgtgag
cgaaaatcaatacccacaagttgggttgaaatttctatcaaagaaggaaaaaatcgtcaa
gtacgtcgaatgacagcccatgttggttttccaacattacgtttaatccgtacaaaaatt
ggaaattatgaattgggaaatcttccttcaggaaagtataaaataataaaataa
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