Lactococcus garvieae ATCC 49156: LCGT_1598
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Entry
LCGT_1598 CDS
T01618
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCGT_1598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgr03019
]
LCGT_1598
03016 Transfer RNA biogenesis [BR:
lgr03016
]
LCGT_1598
Enzymes [BR:
lgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LCGT_1598
Messenger RNA biogenesis [BR:
lgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LCGT_1598
Transfer RNA biogenesis [BR:
lgr03016
]
Prokaryotic type
tRNA degradation factors
LCGT_1598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
PCB_OB
TRAM
Hemerythrin
S1_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
BAK59111
LinkDB
All DBs
Position
complement(1576582..1578861)
Genome browser
AA seq
759 aa
AA seq
DB search
MTKETFRMNFAGRELVVETGQVAKQANGAVVVRYGDTTVLTAASMSKKMANGDFFPLQVN
YEEKMYAAGKFPGGFNKREARPSTYATLTARLIDRPIRPMFADGFRNEVQVINTVLSYDE
NASGRMAAMFGSSLALAISDIPFDGPIAGVEVGYIDGEIVINPDVEQTLQSDLDLIVAGN
IDAINMVESGAKELSETVMLEALLAGHEAIKELIAFQNEIVAKVGKDKAEVELLRVDETL
KAQIIADYNKDLQAAVQVEEKLAREAATQALKERVKAEYETAYAQHEEFERIMRDVSEIL
EGMEHTEVRRLITEDKIRPDGRKVDEIRPLEAEIDFTPNTITHGSALFTRGQTQALSTLT
LAPMGEAQVIDGLDLEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVM
PSLEEFPYAVRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNY
TILTDIQGLEDHFGDMDFKVAGTREGITALQMDIKISGITAEILAEALAQAKRARFEILD
VIEATISEPRSELAPSAPKIDTIKIDTDKIKVVIGKGGETIDKIIEETGVKIDIDEDGLC
SIFSPDQAAINRAKEIITELVREAKVGDVYKAKVVRIEKFGAFVHLFGHTDAMVHISELA
WDRTNKVEDALKLGDLVKVKITKVDDKGRVDASVRALLEKPEGYVEPEHKPRERRNGNNG
NGHRGYHKEKPSGPKFERRERKAPVIDEEFPELSTTRPE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaactttcagaatgaattttgcaggacgtgagcttgttgttgaaacaggt
caagttgccaagcaagccaatggtgcagttgttgttcgctatggagacacaaccgtgctg
actgcagcaagcatgtcgaaaaaaatggcaaacggtgattttttccctttgcaagttaat
tatgaagaaaaaatgtatgccgcaggaaaatttcctggaggctttaataagcgtgaagca
cgcccatcaacgtatgctactttgactgcccgattgattgatcgccctatacgtccaatg
tttgctgatggttttcgaaatgaagtgcaagtcatcaatactgtactttcctatgatgaa
aacgcaagtggacgcatggcagcgatgttcggaagttccttggcactagccatttcagat
attccttttgacggtccgattgcgggtgttgaagtgggctatatagatggagaaattgtc
attaatcctgatgttgagcagaccctacagtctgatttggatcttattgtcgctggaaat
atagatgcgatcaatatggtagagtcaggggcaaaggaattatcagaaacggttatgctc
gaagctctccttgcaggacacgaggcgattaaagaacttattgctttccaaaatgagatt
gttgccaaagttggtaaggacaaggcagaggttgaacttttacgtgtcgatgaaacgttg
aaagctcaaattattgcagactataataaagacttgcaggctgctgtacaagtggaagaa
aagcttgcgcgtgaagctgccactcaagcccttaaagagcgtgtcaaagcagaatatgaa
acagcctatgcccaacacgaagagtttgaacgaatcatgcgtgatgtttctgagattctg
gagggaatggaacatacagaagtccgtcgcctcatcacagaggataaaattcgtcctgat
ggtcgtaaagtcgacgaaattcgtcctttggaagcagaaatcgactttacaccaaataca
attacccacggctcagctctctttacacgagggcaaacgcaagccttgtcaaccttgact
ttggccccgatgggtgaagcacaagttattgatggcttggatcttgaatataaaaaacgt
ttcatgcaccactataattttccgcagtattcagtaggagaaactggacgttatggtgcg
cctggacgccgcgaaataggtcatggtgcacttggtgaacgcgcgcttgagcaagtgatg
ccgtcactggaagaatttccttatgcggtacgtttagttgcggaagtactagagtcaaat
ggctcttcatcgcaagcttcgatttgtgcagggacactggccttgatggctggaggagta
ccgatcaaggcacctgtagctggaattgctatgggcttaatctcggatggttccaactat
actattttgacagatattcaaggtttggaagatcactttggcgatatggatttcaaagtt
gcaggtacacgtgaggggattactgctttacaaatggacatcaaaatttcaggcatcact
gccgaaattttggcagaagcacttgcacaggcaaaacgtgcccgctttgaaatattagat
gtgattgaagcaacgatttcggaaccccgttcagaacttgcaccatcagcgcctaaaatt
gatacgattaaaattgatacggataaaattaaggttgttattggtaagggcggcgaaacg
attgacaaaattatcgaagagacaggtgtcaaaatcgacattgatgaagatggactttgt
tctatcttttcgcctgaccaggcagcgattaaccgcgcgaaagaaatcattacagaatta
gtccgcgaagctaaggtcggcgatgtctataaagccaaggtagtaagaatcgaaaaattc
ggagcatttgttcatctttttggccatactgatgcgatggtgcatatttcagaacttgca
tgggatcgcacgaacaaagtagaagatgccttgaagcttggagatcttgttaaagtcaag
attacaaaagttgatgacaaaggtcgtgttgacgcctcagtacgtgctttactagaaaaa
ccggaaggctatgtagaacctgagcataagccacgcgaacgtcgtaatgggaataacgga
aatggtcatcggggataccataaagaaaaaccatctgggcctaaatttgagcgtcgtgaa
cgcaaagcgccagtcatagacgaagagtttccagaattatcaacaactcgaccagaatga
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