Lactococcus garvieae ATCC 49156: LCGT_1636
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Entry
LCGT_1636 CDS
T01618
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCGT_1636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgr03019
]
LCGT_1636
Messenger RNA biogenesis [BR:
lgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCGT_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BAK59149
LinkDB
All DBs
Position
complement(1615399..1617015)
Genome browser
AA seq
538 aa
AA seq
DB search
MNVISLVLLVLLIVLVIAFIFYAQNIKKNKQDAESLFMQAENKANEITANAQRDAALVRK
EAEILRDEAEAFKKEARFNLREEEQKQRREIEDEFKQDRKELKETEQRLKQREEVLDRKD
DKLTNKERSLDSKEEALSKKTDTLNKREQELLEIEEKKQEELERIAALTKEEAKEIILSE
TRDGLTKEMAQLIRSSEEKAHAEADKRAKNIVSLAIQRVSSDSVAEQTVSVVTLPDDGMK
GRIIGREGRNIRTFEALTGIDVIIDDTPEAVVLSGFDPIRREIARMTLEQLVQDGRIHPA
RIEELVEKNRKALDHKMREYGEQAAFEVGAHNLHPDLMKIMGRLHFRTSYGQNVLDHSVE
VANVAGNLAGEMGENVTLAKRAGFLHDIGKALDHEVEGSHVEIGTELARKYKENPIVINT
IASHHGDTEPNSNIATLVAAADALSAARPGARRESIENYIKRLRDLENISTSFDGIESAF
ALQAGREVRVMVKPEKLTDDQIVILARDVKNRIEDEMDYPGNIKVTVIRETRAIDYAK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatatcactcgttctgcttgtcttattgattgtattggttattgcctttatt
ttttatgcccaaaatattaagaaaaacaagcaagatgctgagagtctttttatgcaggca
gaaaacaaggcaaatgagataacggcaaatgcacagcgtgatgctgctcttgtaagaaaa
gaagcggagatcctgagggacgaagcagaagcattcaagaaagaagcgcgttttaatctt
cgtgaagaagaacaaaagcaacgccgtgaaatcgaagatgaatttaagcaagatcgtaag
gagttaaaagaaactgaacaacgcctaaaacaacgtgaagaagttctagaccgtaaggat
gataaacttacaaacaaagaacgtagcttagactctaaagaggaagcgctctctaaaaaa
actgatacactcaataaacgtgagcaagaacttttagaaattgaagaaaagaaacaagaa
gaattagaacgtatcgctgctttaacaaaagaggaagcgaaagaaatcattcttagtgaa
acccgtgatggtttaacaaaagaaatggcacagcttattcgttcaagcgaagaaaaagca
catgctgaagctgataaacgtgcgaaaaacattgtttcacttgcaatccaacgtgtctct
agcgattcggttgctgaacaaacagtatcagtagtgactttaccagatgatggtatgaag
ggacggatcatcggacgtgaaggccgtaatatccgtacctttgaagccttgacgggtatt
gatgttattattgatgatactccagaagctgttgtattatctggctttgatccgattaga
cgtgagattgcacgaatgaccttggaacaattggttcaagatggtcgtattcaccctgca
cgtatcgaggaacttgttgagaaaaatcgcaaagcattggatcacaagatgcgcgaatat
ggtgaacaagctgcctttgaagttggggctcacaaccttcatccagacttaatgaaaatc
atgggtcgcctgcatttccgaacttcttatggacaaaatgtgcttgaccattcagttgag
gtggcaaatgttgccggaaatcttgcgggtgaaatgggcgaaaatgtgactctcgctaaa
cgtgccggcttcttacatgatattggtaaagcactggatcatgaagttgaaggtagtcac
gtcgagattggtacagaacttgcacgtaagtacaaggaaaatccaatcgttattaatact
attgcgagtcaccatggcgatacagaaccaaacagtaatattgctactttggttgctgca
gctgatgctttaagtgcagcgcgtcccggagcacgtcgtgaatcgattgaaaattatatt
aaacgactgcgtgatttggaaaatatctcaacaagttttgatggtattgaaagtgccttt
gcattacaggcaggacgcgaagttcgtgtcatggttaaaccagaaaagcttacagatgat
caaatcgtaatacttgcacgagatgtgaaaaatcgtattgaagacgagatggattatcca
gggaacattaaagttacagttattcgtgaaacacgagctattgactatgcaaaataa
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