Leuconostoc gasicomitatum: LEGAS_0672
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Entry
LEGAS_0672 CDS
T01267
Name
(GenBank) ATP-dependent RNA helicase/Autoaggregation-mediating protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lgs
Leuconostoc gasicomitatum
Brite
KEGG Orthology (KO) [BR:
lgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgs03019
]
LEGAS_0672
03009 Ribosome biogenesis [BR:
lgs03009
]
LEGAS_0672
Enzymes [BR:
lgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LEGAS_0672
Messenger RNA biogenesis [BR:
lgs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LEGAS_0672
Ribosome biogenesis [BR:
lgs03009
]
Prokaryotic type
rRNA helicases
LEGAS_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
Helicase_RecD
DUF829
DUF7627
Motif
Other DBs
NCBI-ProteinID:
CBL91320
LinkDB
All DBs
Position
687601..688965
Genome browser
AA seq
454 aa
AA seq
DB search
MAETANQFGQFNLKPEIIVALTKIGFTQPTPVQAKLIPSILQGNDVVGQSQTGSGKTHTF
LIPILNQLSQNEQYVQAVITTPSRELAAQITKAAKDFAESWQQNVTISEFVGGTDKMRQI
KQLEKGQPQIVIGTPGRIKDLVSTGALKLHAVHTLVVDEADMTLDMGFLSEVDFIAGAMP
DKLQTLVFSATMPEKLKPFLKKYLDNPKFEAIPVSTVIADTIDNWLLATKSKNRNDVIYQ
VLSIGNPYLALVFANTKERAKEIASNLRGRGLKVAEIHGDIEPRERRRVMKAIQNLEFQY
VVATDLAARGIDIEGVSHVINDDIPDELEFFVHRVGRTGRNGLAGLAITLYGPDEEQEVA
ELEALGINFKAKQIKDGEIVDVKDRRARKQRVATTKKLDPTMVGMVKKKKKIVKPGYKRR
IKSAIQRKDQMDRRISKREEMRATRKENKKRGDR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacagcaaaccaatttggacaatttaatttaaagccagaaatcattgtagct
ttgaccaaaattgggtttacacaaccaacaccagtacaggctaagcttattcctagtatt
ttgcaaggaaacgatgttgttggtcaatctcagacagggtctgggaaaacacatacattt
ttgataccaatattgaaccaattgtcacaaaatgaacaatatgtgcaggctgtaattaca
acaccatctcgtgagctagcagcacaaattaccaaggcagctaaagacttcgcggaaagt
tggcaacaaaatgtgacgatttcagaatttgtcggtggtacagacaaaatgcgacaaatc
aagcaacttgaaaaaggtcaacctcaaattgttattggcacaccgggtcgaattaaagat
ttggtgtcaaccggtgctttaaagttacatgctgtacacacactggttgttgatgaagca
gatatgacacttgacatgggatttttgagtgaagtagattttatagctggtgcaatgcca
gataaattacaaactttggtattcagcgcaaccatgccagaaaaattaaagccattttta
aagaagtatttggataatccaaaattcgaagctattcctgtatcaactgttattgcagat
actattgataactggctattagcgacaaaatcaaaaaatagaaatgatgtgatatatcaa
gtattatcaattggcaatccttatttggcattggtatttgctaatacaaaagaacgtgca
aaagaaattgcttcgaatttgcgtggccgtggtttaaaagttgcagaaattcatggtgat
attgaaccacgtgaacgtcgacgtgtgatgaaagcaatccaaaacttagaatttcaatat
gttgtcgcaactgatttggcggcccgtggtattgatattgaaggcgtatcgcatgttatt
aatgatgatattccagatgagctagaatttttcgttcatcgtgtcggacgaactggtcgt
aatgggttagcgggtctcgcaattacgttatatggtccagatgaagagcaagaagttgcg
gaattagaagcgcttggtattaattttaaagctaagcaaattaaagatggtgagattgtt
gatgttaaggatcgccgagcacgtaaacaacgtgtcgccacaaccaaaaaattagatcca
acaatggttggtatggttaaaaagaagaaaaaaattgttaaaccgggttataagcgccga
attaagtcagcgattcaacgtaaagatcaaatggatcgccgtatttcaaagcgagaagaa
atgcgcgctacacgtaaggaaaataaaaagcgtggtgataggtaa
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