Leuconostoc gasicomitatum: LEGAS_0719
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Entry
LEGAS_0719 CDS
T01267
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lgs
Leuconostoc gasicomitatum
Pathway
lgs03410
Base excision repair
lgs03430
Mismatch repair
lgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEGAS_0719 (recJ)
03430 Mismatch repair
LEGAS_0719 (recJ)
03440 Homologous recombination
LEGAS_0719 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgs03400
]
LEGAS_0719 (recJ)
DNA repair and recombination proteins [BR:
lgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LEGAS_0719 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LEGAS_0719 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LEGAS_0719 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBL91367
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Position
736247..738211
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AA seq
654 aa
AA seq
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MSQNNWHILPQPTEKTVRQLTTKLNIDPLTATVVAQKGFITPEAAYQYLQPSIDQLHDPM
LLHDMDKAFERLTEAAFGGEKIVVYGDYDLDGMTSTAVMVEALEVLGADVTAYIPNRFKD
GYGPNIDVYKRLIAEGAQIIVTVDNGVSGHEAVAYAMSQGVDVIITDHHEMPPTLPEAYA
IVHPRHPDGHYPFDDLSGVGVAFKVAQALLTDGQSITDKSELPTEMLDLVALGEIADMVS
LTDENRTLVSWGLKQINDNPRPGLVALLKNAGQMVNQPIISETVSFKIAPRLNAVGRLGD
AQLALDLLLSQDSDEATEIASQIEAINAQRQEFVEEVFGAAKQIALSDKHANDQVLVVAG
ENWHQGILGIVASRLVELLHKPVIVLSLIDGIYKGSGRTYNNFDLYQLMGQYRSFYDTFG
GHASALGLAISPENLSALREQLAVLPTLDVPEISVAVNMMLPVSKMAIPVYEGLTLLEPF
GTGNVQPTFGVQEPTIEKAVTMGSTNQHLKLTLANQIEAVGFNHPEWTTIVAHPANISFV
ATMGLNYFRGKKRLQLLLTDVSMPPIVENDAHKKFFGHVYKFIYAHQDLNFAQNLDKIAE
QLNITKNDLNIMVQVFIELGFVKVIDGGFVKVIPNAPQKTLTTSKTYHKFLANR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaacaattggcatatattaccacagccaacagaaaagacagtacgtcaactc
acaacaaaactaaatattgatccattaactgcaaccgttgtcgctcaaaaaggatttata
acccctgaagcagcctatcagtacttgcaaccaagtattgatcagttacatgatccgatg
ctactacatgacatggataaagcatttgaacggcttactgaagcagcatttggtggtgaa
aaaatagttgtttatggcgattatgatttagatggcatgacaagtaccgcagtcatggtt
gaggcgctcgaagtattaggtgctgacgtaactgcctatatacctaatcgttttaaagat
gggtatggtccaaatattgatgtttataagcgtttaatagctgaaggcgcgcaaattatt
gtcactgttgataatggtgtgagtggtcatgaagcagttgcttacgcaatgagtcaaggt
gtcgatgtgattattactgaccaccatgaaatgccgcccactttacctgaggcctatgct
attgtgcacccaagacacccagacggtcattatccattcgatgacttgtcaggtgttggt
gtggcattcaaggttgcacaagcgcttttaacagatggtcaatcaatcacagataaaagt
gaattaccaacagaaatgttggatttggtggctttaggcgaaattgccgacatggtgtca
ttgacagacgaaaatagaacattagtgtcatgggggttgaaacaaataaatgacaatcca
cgtccagggttagtcgcattacttaaaaatgctgggcaaatggtgaatcaacccattatt
tcagaaacggtgtcattcaaaattgcaccacgtttgaatgccgttggtcgtttaggcgat
gctcagttagctcttgatttattgctaagtcaagattctgatgaggccactgaaattgcc
tcacaaattgaggcaatcaatgcgcaacgtcaagaatttgtagaagaagtgtttggcgct
gccaaacaaatcgcgttatcggataaacatgctaacgatcaagtgcttgttgttgcaggt
gaaaactggcatcaaggaatcctaggtatagtggcaagtcgattggttgaattattgcat
aaaccagtgattgtgttgagtttaatagatggcatctacaaaggctcaggtcgcacttac
aataactttgatttgtatcaattgatgggtcaatatcgttcgttttatgatacatttggt
ggtcacgccagtgcactagggttggcaatatctccggaaaacttgtctgcattacgcgaa
caactagcagtgttaccaacccttgatgtgcctgaaatatcagtagctgttaatatgatg
ttaccggtatctaaaatggcaatacccgtctatgaaggattaactttattagaacccttt
gggacaggcaatgtgcagccaacttttggtgtacaagaaccaacaattgaaaaggctgtc
acgatgggatcaacaaaccaacatcttaagttaacacttgctaatcaaattgaggcagtt
ggttttaatcatcctgagtggacaacgattgttgctcatccagccaatatatcgtttgtc
gcaacaatgggattgaactattttcgtggtaagaaaagattacaattattgttgacagac
gtttctatgccacctatagttgaaaatgatgcacataagaaattttttggccatgtttat
aaatttatttatgcgcatcaggacttgaattttgcacaaaatttggataaaatagcagag
cagctaaatattactaaaaacgatcttaatattatggtacaagtctttattgaattagga
tttgtaaaagtgattgatggcggttttgtaaaagtgattccaaatgcaccacaaaagaca
ttgacaacgtcaaaaacttatcataaatttctagcaaaccgttaa
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