Leuconostoc gasicomitatum: LEGAS_1021
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Entry
LEGAS_1021 CDS
T01267
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lgs
Leuconostoc gasicomitatum
Brite
KEGG Orthology (KO) [BR:
lgs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LEGAS_1021 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgs03021
]
LEGAS_1021 (rpoD)
Transcription machinery [BR:
lgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LEGAS_1021 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HeH
Ish1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
CBL91669
LinkDB
All DBs
Position
complement(1040376..1041674)
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AA seq
432 aa
AA seq
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MATILASSKISDIKDYLDEQKISYNSRAKKAELLALAQGKTPEEAAAAGKASKPKVAKKS
GIIKNPEYDKAVKALIAEYKAAKAITYADLAKRLAEPFNLDGENIERLMEKVEDSGVAIV
DEKGEPAPEVLKAKQNKPSKEELDQAQETPAGIKINDPVRMYLKEIGRVNLLKGDEEINI
AKRIEDGDIEAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPLPEEIG
AEMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDNEAVSPADSAAYEMLREQL
ESVLETLTDREENVLRLRFGLEDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFMDDGNN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcaactattttagcttcaagtaaaatttcagacatcaaggattacctagatgaacaa
aaaatctcatacaatagccgtgctaaaaaagcagaacttttagcattagcacagggcaaa
acaccagaggaagctgctgccgctggcaaagcttctaagcctaaagtggccaaaaaatca
gggattattaagaaccctgaatatgataaagctgtcaaggcgttgattgcagaatataag
gctgctaaagcaattacatatgcagatttggcaaaaaggttagcagaaccatttaattta
gacggtgaaaatatcgaacggttaatggaaaaagttgaagattctggtgttgcaattgtt
gatgaaaaaggtgaaccagcacctgaagtattaaaggcaaagcaaaataagccatccaaa
gaagagttagatcaagcacaagaaacacctgccggcattaaaataaacgatcctgtgcgt
atgtaccttaaagaaattggtcgtgttaatttattgaaaggtgacgaagaaattaatatt
gctaaacgcattgaagatggtgatattgaagccaaacaagaattagcagaagctaattta
cgattggttgtttctattgctaaacgatatgttggtcgtgggatgcaatttttggatttg
attcaagaaggtaacatgggtttgatgaaagccgttgataagtttgattacaccaaagga
ttcaagttttcaacctatgctacatggtggattcgtcaggcaataacacgcgctattgct
gatcaagcgcgcaccattcgtattcctgttcatatggttgaaacaattaataaattaatt
cgtattcaacgtcagttgcttcaagatttgggtcgtgaaccattgccagaagaaattggg
gctgaaatggatttgacacctgataaagtacgtgaaatattaaaaattgcgcaggaacca
gtttcacttgaaacaccgatcggtgaagaagatgattcacatttaggggactttattgag
gacaatgaagctgtttccccagctgattcagcagcatatgaaatgttacgtgaacaactt
gaatctgtgttggagacattaactgaccgtgaagaaaatgtgttacgtttgcgttttggt
ttggaagatggccgcacacgtacacttgaagaggtaggtcgtgtatttggtgtgacaaga
gaacgtattcgccaaattgaagctaaagcattgcgtaagctccgccaccctagtcgttcc
aagcaattaaaagattttatggatgatggcaataattaa
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