Leuconostoc gasicomitatum: LEGAS_1057
Help
Entry
LEGAS_1057 CDS
T01267
Name
(GenBank) predicted hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lgs
Leuconostoc gasicomitatum
Pathway
lgs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEGAS_1057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgs03019
]
LEGAS_1057
Messenger RNA biogenesis [BR:
lgs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LEGAS_1057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_3
RMMBL
Motif
Other DBs
NCBI-ProteinID:
CBL91705
LinkDB
All DBs
Position
complement(1076604..1077797)
Genome browser
AA seq
397 aa
AA seq
DB search
MRMQVKFLNGLNTIGGNVVSFTQGKTRLVMDFGVNFAPSETPTGDLLANGTLPDLPDLFT
DVSSEYETTIFVSHLHLDHMGALKYLTKPIDVYMSQASADLYYVLTKLGIESAPYANIKV
IDFEKPTSFGDFEVTFFETDHDARGAAAIRIRNGEHTVVHSGDVRLDGPHPERVNHWADV
LRDENIDLLLLEGTEFSFDEANDIAHERYTEMSLQQNFAQILQSSEQLVVINPYERNIDR
LVALQATVQANGREMRWDHQFATILLAVGMTDVKEIDWETVLAQPGHYVIQNHFNQLHDL
DQFNGDYVYLHMNGEPLGEYDPRFAELSDYLTNNDVLFCSLGVSGHATPDDLVALAQHIS
AKKTVTWHSFKPEKEAKALREVGLNVYLPTKGETLNY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgcaagtaaaattcttaaatggactcaatacaatcggggggaatgttgtatca
tttacgcagggaaaaacaaggcttgtgatggattttggtgtcaattttgcaccatctgaa
acacctacaggggatttattagccaatggcacactaccagatttacctgatttatttact
gatgtgagtagtgaatatgagacaacaatatttgtctcacatttacacttagatcatatg
ggcgctttgaaatatttaacaaagcctatcgatgtttacatgagtcaagcatctgctgat
ttatactatgttttaacaaaattagggatcgaatctgcgccttacgcaaatattaaagtc
attgattttgaaaaacccactagttttggtgactttgaggtgactttctttgaaacagat
catgatgcacgtggtgcagcagctattcgtatacgaaacggggagcatacagtcgttcat
agtggcgacgtacgattagatggtccgcatccagaacgtgtaaatcattgggcagatgtt
ttacgtgacgaaaacattgatttgttgttactagaaggcactgaatttagttttgatgaa
gcaaacgatattgcacatgagcgctatacagaaatgtcattgcaacaaaattttgctcaa
atattacagagctcagaacaattggttgtgatcaacccctatgaacgtaatattgatcgt
ttagtagctttgcaagcaactgtacaagctaatggacgtgaaatgcgttgggatcatcaa
tttgctacaatcctgcttgcggtggggatgaccgatgtcaaagagattgattgggagact
gttttagctcagccaggtcactatgtgattcaaaatcattttaatcagttacatgatttg
gatcagtttaatggcgattatgtttacttgcatatgaacggcgaaccacttggtgaatat
gatccacgttttgctgaactaagtgattacttaactaacaatgatgtgctattttgcagt
ctgggggtcagtggacacgctacgccagatgatttagtggctttggcacaacacattagt
gccaaaaaaacagtgacatggcattcattcaagccagaaaaagaggcgaaagctttgcga
gaagttggattgaatgtttatttaccaactaaaggtgaaactttgaactattag
DBGET
integrated database retrieval system
