Leuconostoc gasicomitatum: LEGAS_1176
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Entry
LEGAS_1176 CDS
T01267
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lgs
Leuconostoc gasicomitatum
Pathway
lgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LEGAS_1176 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgs03400
]
LEGAS_1176 (recD)
Enzymes [BR:
lgs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LEGAS_1176 (recD)
DNA repair and recombination proteins [BR:
lgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LEGAS_1176 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_12
AAA
AAA_22
UvrD_C
nSTAND3
NPHP3_N
NACHT
TIP49
AAA_5
TrwB_AAD_bind
AAA_16
AAA_28
CoV_NSP13_1B
DUF815
NTPase_1
Mg_chelatase
TsaE
NB-ARC
AAA_29
PEP-utilisers_N
WHD_HELB
nSTAND_NTPase5
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CBL91824
LinkDB
All DBs
Position
complement(1204556..1206940)
Genome browser
AA seq
794 aa
AA seq
DB search
MAYQEQQLEKITGTLQNVIFASSDSYFKILSILIEESTLESWQEPEIIATGTFADVQEGS
VYAFYGTVVRHPKYGQQLKVMRYENELPPDEEGLIKYFVSGQFSGIGQKTAEKIVDHLGL
NAVNLILDDVHVLDGIIKEATAKKLVHSLQLNLGLERLFQVGNQFGIGADIAGRLYDQYG
SEAQDILIQDPYRLVFEFDGISFKTADQIGQKSGIDHLDERRLQAAVYAAITTVSFQYGH
TYLTRQQLLQSTAQLLRDEELKGALEQAITKLLATHILVADNDKLYTTALYDAETQVAHD
LKRLLQAKQPFEMSVADIDAAFITPGQLELDRTQIAAVKAGLNAQVFLLTGGPGTGKTTI
VRSIVATWQKILQKRAKYSDQAQDFLKMYSVKMASPTGRAAKRMTEVTGHDATTIHRLLG
IADLGEPEFTADNPISGGLLIIDEASMLDIELTAKLLAAVPNGMKLIIVGDSDQLPSVGP
GNVLADLVASGKMTHVELDTIYRQGRGSSITKLAQHIKNGQLPEDFMQNQPDRSTFMVSH
DQTDMAIKQVVQAAIKKGYTQDDLQILTPIYKTTAGVNALNTMAQELFNPIKPAQKSLQF
GTTIFRKGDKILQLENDSERDVYNGDMGKIIAVQYKNDKSNDDHEDRLLVDFDGKELSYP
KKNLNQLSLAYATTVHKAQGNEFKLVIVALTTRFGLMLNRNLLYTGITRAKEALILVGEY
EAFSRAAQTAVAYRATFLTERLKDEVVIQQKNSHDKKTERAILKNILTFELIQSDTIEPL
IGLNGITPYDFMPN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagaacaacaactcgaaaaaattactggtacgttacaaaatgttatattt
gcatcgtctgattcctactttaaaatcttgtctattctgattgaagaatcaacgcttgaa
agttggcaagagcctgaaattattgcaactggcacatttgccgatgtgcaagagggcagt
gtatacgctttttatggtacggttgtgcggcacccaaaatatggacagcaactgaaagta
atgcgctatgaaaatgaattacctcccgatgaagaagggctcatcaaatattttgtgagt
gggcaattttcaggtattggtcaaaagacagctgaaaaaattgttgatcatttgggttta
aatgctgttaatttaattttggatgatgttcatgtattggatggtatcatcaaggaagct
actgcaaaaaaacttgtccatagtttgcaattgaatttgggcttagaacgcttatttcaa
gttggcaaccaatttggcattggtgcagatattgccggacgattgtatgatcaatatggt
agtgaggcacaagatattttgattcaagatccttatcgtttggtgtttgagtttgatggt
atatcgtttaaaacagcagatcagatcggacaaaaatcgggcattgatcatttggatgaa
agacggttacaggcagcagtttatgctgcaataacgactgttagctttcaatatgggcat
acttatttaacgcgacaacagctactgcagtcaacggcacaattattgcgtgatgaggaa
ctaaagggtgcattagaacaggcaattaccaaactattggcaacccatattttagtggct
gacaatgataaattatatacaacagctttgtatgatgcagaaacacaagtagcccatgac
ttgaaacgtttattgcaggcaaagcaaccatttgagatgtcagttgcagatatcgatgcg
gcttttatcacgccgggccaattagaactcgataggacacaaattgcggcagttaaagca
ggattgaacgcacaagtatttttgcttactggtgggcctggaacaggaaagacaaccatc
gttcgttcaattgttgcaacatggcaaaaaattcttcaaaagcgtgctaaatactctgat
caggcacaggattttttgaaaatgtattcagttaaaatggcatcgccaactggtcgagca
gccaaacgtatgactgaagtaactggacatgatgcaacaacaatacaccgtttacttggt
attgctgatttaggtgaaccagagtttacggctgataatccaatttcaggcggtctgctc
attattgatgaggcatcgatgttggatattgaattgacggctaaactacttgccgcagtg
ccaaatggtatgaaactaatcattgttggtgattcagatcagttgccttcagttgggccc
ggtaatgtattagcggatctggtcgcgagtggaaaaatgactcatgtagagcttgataca
atttatcgacaaggtagaggaagcagtattaccaagttggcacaacatatcaaaaatggt
cagttaccggaagattttatgcaaaatcaacctgatagatcaacgtttatggtgtcacat
gatcaaaccgatatggcaattaaacaggtggtccaagctgctataaaaaagggatatact
caggatgatttacaaattctaacgccgatttataaaacgactgctggtgttaatgcgttg
aatacaatggcgcaagaattatttaatccaatcaaaccagctcaaaaatctttgcaattt
gggacaacaatcttccgtaaaggagataaaattttgcaattagaaaatgatagtgagcgt
gacgtgtataatggggatatgggtaaaattattgctgtgcaatataaaaatgataaaagt
aatgatgatcatgaggatcgattactggttgattttgacggaaaggaattatcttatcct
aagaaaaatttaaatcaattatcacttgcttatgcaaccactgtacataaggcacaaggc
aatgagtttaaacttgtaattgttgccttaacaacccgatttggtttgatgctcaatcga
aacttactttacacaggtattacgcgtgcaaaagaagctttaattttggttggtgaatat
gaagcatttagtcgtgctgcgcaaactgcagtcgcatatcgagcaacttttctaacagaa
cgcttgaaagatgaagtagtcattcaacaaaaaaatagtcatgacaaaaaaacagagcgc
gccattttaaaaaatatattaacatttgaattgattcagtcagataccattgagccatta
attggattaaatggtatcacaccatatgattttatgccaaattaa
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