Legionella geestiana: E4T54_09670
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Entry
E4T54_09670 CDS
T06170
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lgt
Legionella geestiana
Pathway
lgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T54_09670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgt03019
]
E4T54_09670
Enzymes [BR:
lgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4T54_09670
Messenger RNA biogenesis [BR:
lgt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4T54_09670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QBS12985
LinkDB
All DBs
Position
complement(2151291..2152502)
Genome browser
AA seq
403 aa
AA seq
DB search
MNFQDLSLATPLLDAVKAQGYETPSPIQQKAIPVVLNGDDLLASAQTGTGKTAGFVLPIL
HQLLEKPRAGSNQTLALILTPTRELAAQVHEDVRQCAQFTKIRSAVVFGGVNINPQMLKL
RSGVEILVATPGRLLDLVRQNAIRLDAVKTFVLDEADRMLDMGFIHDIRRVMALLPKRRQ
NLLFSATFSPEIRALAKSFLHQPVEVSVTPPNSTVDKIKQTIHPVDKAQKAALLCHLAHS
QQWRQALIFSRTKHGANKLVKILAGHNIEAAAIHGNKSQSQRTQALDAFKTGKIRLLVAT
DIAARGIDIDQLPIVVNFDLPQVPEDYVHRIGRTGRAGSSGVALSLVSADEANLLHAIEK
ITKKRLNRVEIDDFEPEHRLPEHIAPAARSSQGPRRQSAGRRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaagatttatcactggccacccctttgcttgacgcggtaaaggcgcaaggc
tacgaaactccatcacccattcagcaaaaggccataccggtagtgcttaatggtgacgat
ttactggcttccgcgcaaaccggaactggaaagaccgcgggctttgtgctgcccattctg
catcaactgctcgaaaagccgcgtgcaggcagcaatcagaccctggcacttatcctcact
ccaacgcgcgaactggcagcccaggtgcatgaggatgtgcgacagtgtgcacaatttacc
aaaattcgcagcgcggtagtttttggcggggttaatatcaacccgcaaatgctgaagttg
cgctcaggcgttgagatactggtagcaacacccggacgcctgcttgatttggtgcgccag
aacgcgatacgccttgatgcggtaaagacgtttgtgctggatgaagccgacagaatgctt
gatatgggatttatccatgatatccgccgcgtcatggcactgctgcctaaacgccgccag
aacctgcttttttcagcaacattttctccagaaattcgcgcgcttgcgaaatcgtttctg
catcaaccggtagaagtatctgtcaccccgcctaacagcaccgttgacaaaatcaagcaa
accattcacccggttgataaagcgcaaaaagccgccctgctctgccaccttgctcacagc
cagcaatggagacaagcattgattttttcacgtactaaacacggcgcgaacaaactcgta
aaaattctcgcaggacacaacatcgaagctgctgccattcatggcaacaagagtcaatcc
cagcgcacgcaggcactcgatgcctttaagaccggtaaaattcgcctcctggtcgcaacc
gacattgccgcacgcggcattgacatcgaccagctgccaatcgtggtcaattttgatttg
ccgcaggtgcccgaagattacgtgcaccgcatcggacgtacgggccgcgccggcagttct
ggcgttgctctctcgcttgtcagtgcggatgaggccaatctgttgcatgcgattgaaaaa
atcaccaaaaaacgcctgaatcgggtagaaatagatgattttgagcctgagcaccgtctt
cctgagcacatagcacctgccgcgcgctcctcccaggggccccgcagacaatctgccggc
agacgcagataa
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