Lysobacter gummosus: LG3211_0091
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Entry
LG3211_0091 CDS
T04163
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LG3211_0091 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_0091 (recC)
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LG3211_0091 (recC)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG3211_0091 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALN89081
LinkDB
All DBs
Position
85259..88675
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AA seq
1138 aa
AA seq
DB search
MSARPDFRLYHSNALDVLAGMLAQELRAPAPGQALLTPDTVLIPQVAMRRWLQATLAQAH
GIAANLEFLTPGEFVQRALEANETGAQAERGEDLDAAALHWRVYATLSQPAQLREPALAP
LRAYLEGDDPIKAWSLSGELASLFEKYQAWRRDWLLAWDAGHERNDAQAALWRRVAAGRR
YRARRIDDYLARFGADHGGPATIPRGLPPRLFAFATLNISPDVLRVIATQALAGTLHFYL
PTPTRKYWGDLGTLAERLRQGEDAAFGEDDNPLLQAWGAAGRDFMAVLGGYEVVHPSGEI
AAYADPEESRHDDPARDSLLQRLQRDLLHRRALPSVPWRAQLDRADASVQVHACHTRLRE
VQVLHDQLQALLDRDSPEGRRFDPPLQPREIAVLAPDIDPYAPHIAAVFGGLAGRPGFIP
YALADVSPLAAEPLAEVFLRLLALPVSRFGLSEILDLLATAAIAEQAGLDSAGLDRLRLW
LGDAGARWGIDAAHRSRHDAPGDDAYTWAFALDRLLIGHAAGGEEASHDMVAGIAPYAEL
EGASLDALDALIRLLRVLARFERGLAADLSPAQWSERLLGLLRALLPERPREAADQRTLE
RLRSLIERFASDAAHAGYDGAVPPEVVRAHFRAALAEADTRAPLLTGGVSFGRMVPMRLI
PFRAICLLGMNDGDYPRRDPAGGLNRLAAELGTAARRHGDRSLRDDDRFLFLQLFAAASD
TFYLSYLGADPRDGSQREPSTLVSELLDVIARYHADPARVRAQFTVREPLQPFAPAAFGA
DAGVGAEPEPRRFSYRGEWRPAVDAGARSQRLELGPWLDDPLPPDPPPADAGGHDGVIDY
RDLRSFLRDPPSAFLRQRLGLKLPDEIDSADDVEPLVLPGPGLFRQQLQRAVFDDLLAGD
GAIDRDRLQAALRARALLPSGPLGRRQLDALLGQVRPFADAFARWRSGEAQALAFDLDLG
EAQLRGRLDDVYAGGLARLRFDTLHGPSQIAHGLDWLVLSALGDARPLAQFAQAADGPGP
HLRPALSPPAAQAALRALLRLRDYGLRMPLPFLPRAGWLWYEAQAQDQDGRGHAGWNKAE
TQWHGSARSWGEASPAGVQLALRGRDPFLDPELGEQFRGIARLVFDAVVHGRDEDGGA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcgccccgatttccgtctctatcactccaatgcgctggacgtgctggccgga
atgctggcgcaggaactgcgcgcgccggcgccgggacaggcgctgttgacgccggacacc
gtgctgattccgcaggtggcgatgcgccgctggctgcaagcgacgctggcgcaggcgcac
ggcatcgccgccaatctggaattcctcacccccggcgaattcgtgcaacgcgcgctggag
gcgaacgaaaccggcgcccaggccgagcgcggcgaagacctcgacgccgccgccctgcac
tggcgcgtctacgccaccttgtcccagcccgcgcaactgcgcgaacccgcgctcgcgccg
ctgcgcgcctacctcgaaggcgacgatccgatcaaagcctggtcgctgtcgggcgaactg
gcctcgctgttcgagaaataccaggcctggcgtcgcgactggctgctggcctgggacgcc
ggccacgagcgcaacgacgcgcaggccgcgctgtggcgccgcgtcgccgccggccgccgc
tatcgcgcgcgccgcatcgacgactacctcgcccgcttcggcgccgatcacggcggcccg
gcgacgatcccgcgcggcctgccgccgcggctgttcgccttcgccaccctcaacatctcg
cccgacgtgctgcgggtgatcgccacgcaagcgctggccggcaccctgcacttctatctg
cccacgcccacgcgcaaatactggggcgatctgggcaccctggccgagcgcctgcgccag
ggcgaagacgccgccttcggcgaggacgacaacccgctgctgcaggcctggggcgcggcc
gggcgcgatttcatggcggtgctgggcggctacgaagtcgtgcatccctccggcgaaatc
gccgcctacgccgatccggaagaaagccgccacgacgacccggcgcgcgacagcctgctg
caacgcctgcaacgcgacctgctgcaccggcgcgcgctgccgtcggtgccgtggcgcgcg
cagctcgaccgcgccgacgccagcgtgcaagtccacgcctgccacacccgcctgcgcgag
gtgcaggtgctgcacgatcaactgcaggcgctgctcgatcgcgattcgcccgaaggccgc
cgcttcgatccgccgctgcagccgcgcgagatcgcggtgctggcgcccgacatcgatccc
tacgcgccgcatatcgcggcggtgttcggcggcttggccgggcggccggggttcattccc
tatgcgctggccgacgtcagcccgctcgccgccgagccgctggcggaagtgttcctgcgc
ctgctcgcgctgccggtgtcgcgcttcggcctcagcgagattctcgatctgctggcgacc
gcggcgatcgccgagcaggccggactggacagcgccggcctcgaccgcctgcgcctgtgg
ctcggcgacgccggcgcgcgctggggcatcgacgcggcccatcgcagccgccacgacgcg
cccggcgacgatgcctacacctgggcgttcgcgctcgaccgcctgctgatcggccacgcc
gccggcggcgaggaggcgagccacgacatggtcgccggcatcgccccgtatgccgaactc
gaaggcgcctcgctcgacgcgctcgacgcgctgatccgcctgctgcgcgtgctggcgcgt
ttcgaacgtggcctggccgccgacctctcccccgcgcaatggtccgagcgcctgctcggc
ctgctgcgcgcgctgctgcccgaacgcccgcgcgaggccgccgatcagcgcacgctggaa
cgcctgcgcagcctgatcgagcgcttcgccagcgacgccgcgcacgccggttacgacggc
gcggtgccgccggaagtggtgcgcgcgcatttccgcgccgcgctggccgaggccgacacg
cgcgcgccgctgctcaccggcggcgtcagcttcggccgcatggtgccgatgcggctgatc
ccgttccgcgcgatctgcctgctcggcatgaacgacggcgactatccgcgccgcgatccg
gccggcggcctcaaccgcctcgccgccgaactgggcaccgccgcgcgccgccacggcgac
cgttcgctgcgcgacgacgaccgcttcttgttcctgcagttgttcgccgccgcctcggac
accttctatctgagctacctcggcgccgatccgcgcgacggcagccagcgcgagccgtcc
acgctggtgtcggagctgctcgacgtgatcgcgcgctaccacgccgacccggcgcgggtg
cgcgcgcagttcaccgtgcgcgaaccgctgcaaccgttcgcgccggccgcgttcggcgcc
gatgccggcgtaggcgccgagccggagccgcggcgtttcagctatcgcggcgaatggcgc
ccggcggtggacgccggcgcgcgctcgcagcggctcgaactgggtccgtggctcgacgat
ccgctgccgccggacccgccgccggccgatgccggcggccacgacggcgtcatcgactat
cgcgatctgcgcagcttcctgcgcgatccgcccagcgccttcctgcgccaacggctgggc
ctgaaactgccggacgaaatcgacagcgcggacgatgtcgaaccgctggtgctgcccggc
ccgggcctgttccgccagcaattgcaacgcgccgtgttcgacgatctgctggccggcgac
ggcgcgattgatcgcgaccgtttgcaggccgcgctgcgcgcgcgcgcgctgttgccgtcg
ggtccgctcggccggcgtcagctcgacgccttgctcgggcaggtgcggccgttcgcggat
gcgttcgcgcgctggcgcagcggcgaggcgcaggcgttggcgttcgatctggatctgggc
gaagcgcagctgcgcggccggctcgacgatgtctatgccggcggcttggcgcgattgcgt
ttcgacaccttgcacgggccctcgcagatcgcccacggcctggactggctggtgctgtcc
gcgcttggcgacgcgcgcccgctggcgcagttcgcgcaggccgcggacggccccgggccg
catctgcgtccggcgttgtcgccgcccgccgcccaggccgcgctgcgcgccttgctgcga
ttgcgcgactacggcctgcgcatgccgctgccgttcctgccgcgcgccggttggctatgg
tacgaagctcaagcgcaggaccaggacggccgcggtcacgccggctggaacaaggccgaa
acgcaatggcacggcagcgcccgcagttggggcgaggccagcccggctggcgtgcaactg
gcgctgcgcgggcgcgatccgttcctggacccggaactgggcgaacaattccgcggcatc
gcccggctggtgttcgacgcggtcgtgcacggacgcgacgaggacggcggcgcatga
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