Lysobacter gummosus: LG3211_0301
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Entry
LG3211_0301 CDS
T04163
Name
(GenBank) pectate lyase family protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00040
Pentose and glucuronate interconversions
lgu01100
Metabolic pathways
lgu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LG3211_0301
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LG3211_0301
Enzymes [BR:
lgu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LG3211_0301
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ALN89291
UniProt:
A0ABY3XDF9
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Position
complement(340046..341545)
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AA seq
499 aa
AA seq
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MERRGLIAVLILGIVSLMPAAASGISMYNIEGYAAASVTGGGYLAESDPKYRRVTTPAGF
IAALRAARTSSSTPVKVIEIANDLDMGWNEVDDAARADGLLRQNKTPKKHPALIASGVSL
LDVTNFNGLTIYSRNGAVLRHVELNIKSGTNLVLRNLRFDELWEWDEGTRGDYDSNDWDF
VTLGDGGGVTSGVWIDHCSFSKAYDGVLDIKKGANNITVSWIETLPPASGPGSFVARQFD
YLEANRAANAMYDFLRGFFTRQQIIDISLPQKKGHLIGSNDLEGISSYTVTLHHNHYRDL
QDRMPRLRGGDVHAYNLYVDSSNARIMKAVRDAVVQANPALRSKVEGSSPTYKFDVVLNG
SVSTEGGAVQVERSLFWGVFTPLRNNQTDPDDSRYTGAIRALGVRHVLFASDINYMPASS
QQATFVDRGIVWASWEGNSGAAGSTLGPAQAAQVPFVWRNGVPSYPMTLHGIDELGNLRA
WMGAGKVSMTAQQWMRVVN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaacgccgcggcctgatcgcggtattgatcctcggcatcgtgagcctcatgccggcc
gccgcgtcggggatttcgatgtacaacatcgaaggctatgcggcggccagcgtcaccgga
ggcgggtacctcgccgaatccgatcccaaataccggcgcgtgaccacgccggcgggcttc
atcgccgcgctgcgcgccgcgcgcacttcgagttccactccggtcaaggtcatcgagatc
gcgaacgatctcgacatgggctggaacgaggtcgatgacgcggcccgcgccgacggcctg
ctgcgccagaacaagacgcccaagaagcatccggcgttgatcgccagcggcgtgtccctg
ctcgatgtgacgaacttcaacgggctgacgatctattccaggaacggcgccgtgctgcgc
catgtcgaactcaacataaagagcggaaccaacctggtcctgcgcaacctgcgtttcgac
gagctgtgggaatgggatgagggaacgcgcggggactacgacagcaacgactgggatttc
gtcactctcggcgatggcggcggcgtgacctccggcgtctggatcgatcactgcagcttc
agcaaggcctatgacggtgtcctcgacatcaagaagggcgcaaacaacatcaccgtgtcg
tggatcgaaaccctgcctccggccagcgggcccggcagcttcgtggcgcggcagttcgac
tacctcgaggccaatcgcgcggccaatgcgatgtacgacttcctgcgcggcttcttcacc
agacagcagatcatcgatatatcgctgccgcagaagaaaggacacctgatcggctcgaac
gatctcgaaggtatttcgtcctacaccgtgaccctgcatcacaaccattatcgcgatctg
caggaccgcatgccccgcctgcgcggcggcgacgtgcacgcctataacctgtacgtcgac
agctccaatgcgcggatcatgaaagccgtccgcgatgccgtcgtccaggcgaacccggcg
ttgcggtccaaggtcgagggcagctcgccgacgtacaagttcgatgtggtgttgaacggc
tcggtgtccaccgaaggcggcgcggtccaggtcgagcgcagcttgttctggggcgtattc
acgccgctgcggaacaatcagaccgatcccgacgattcgcgctacaccggcgcgatccgc
gccctcggcgtccgccatgtgctgttcgcgagcgacatcaactacatgccggcgtcgtcg
cagcaggcgacgttcgtcgatcgcggcatcgtgtgggccagttgggaaggaaacagcggt
gcggcgggcagcacgctcggcccggcccaggcggcgcaggtcccgttcgtctggcgcaac
ggcgttccctcgtacccgatgacgctgcatgggatcgatgagctcggcaacctgcgcgcc
tggatgggcgccggaaaggtgagcatgaccgcgcagcaatggatgcgggtcgtcaactag
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