KEGG   Lysobacter gummosus: LG3211_0301
Entry
LG3211_0301       CDS       T04163                                 
Name
(GenBank) pectate lyase family protein
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
lgu  Lysobacter gummosus
Pathway
lgu00040  Pentose and glucuronate interconversions
lgu01100  Metabolic pathways
lgu02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    LG3211_0301
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LG3211_0301
Enzymes [BR:lgu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     LG3211_0301
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: ALN89291
UniProt: A0ABY3XDF9
LinkDB
Position
complement(340046..341545)
AA seq 499 aa
MERRGLIAVLILGIVSLMPAAASGISMYNIEGYAAASVTGGGYLAESDPKYRRVTTPAGF
IAALRAARTSSSTPVKVIEIANDLDMGWNEVDDAARADGLLRQNKTPKKHPALIASGVSL
LDVTNFNGLTIYSRNGAVLRHVELNIKSGTNLVLRNLRFDELWEWDEGTRGDYDSNDWDF
VTLGDGGGVTSGVWIDHCSFSKAYDGVLDIKKGANNITVSWIETLPPASGPGSFVARQFD
YLEANRAANAMYDFLRGFFTRQQIIDISLPQKKGHLIGSNDLEGISSYTVTLHHNHYRDL
QDRMPRLRGGDVHAYNLYVDSSNARIMKAVRDAVVQANPALRSKVEGSSPTYKFDVVLNG
SVSTEGGAVQVERSLFWGVFTPLRNNQTDPDDSRYTGAIRALGVRHVLFASDINYMPASS
QQATFVDRGIVWASWEGNSGAAGSTLGPAQAAQVPFVWRNGVPSYPMTLHGIDELGNLRA
WMGAGKVSMTAQQWMRVVN
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggaacgccgcggcctgatcgcggtattgatcctcggcatcgtgagcctcatgccggcc
gccgcgtcggggatttcgatgtacaacatcgaaggctatgcggcggccagcgtcaccgga
ggcgggtacctcgccgaatccgatcccaaataccggcgcgtgaccacgccggcgggcttc
atcgccgcgctgcgcgccgcgcgcacttcgagttccactccggtcaaggtcatcgagatc
gcgaacgatctcgacatgggctggaacgaggtcgatgacgcggcccgcgccgacggcctg
ctgcgccagaacaagacgcccaagaagcatccggcgttgatcgccagcggcgtgtccctg
ctcgatgtgacgaacttcaacgggctgacgatctattccaggaacggcgccgtgctgcgc
catgtcgaactcaacataaagagcggaaccaacctggtcctgcgcaacctgcgtttcgac
gagctgtgggaatgggatgagggaacgcgcggggactacgacagcaacgactgggatttc
gtcactctcggcgatggcggcggcgtgacctccggcgtctggatcgatcactgcagcttc
agcaaggcctatgacggtgtcctcgacatcaagaagggcgcaaacaacatcaccgtgtcg
tggatcgaaaccctgcctccggccagcgggcccggcagcttcgtggcgcggcagttcgac
tacctcgaggccaatcgcgcggccaatgcgatgtacgacttcctgcgcggcttcttcacc
agacagcagatcatcgatatatcgctgccgcagaagaaaggacacctgatcggctcgaac
gatctcgaaggtatttcgtcctacaccgtgaccctgcatcacaaccattatcgcgatctg
caggaccgcatgccccgcctgcgcggcggcgacgtgcacgcctataacctgtacgtcgac
agctccaatgcgcggatcatgaaagccgtccgcgatgccgtcgtccaggcgaacccggcg
ttgcggtccaaggtcgagggcagctcgccgacgtacaagttcgatgtggtgttgaacggc
tcggtgtccaccgaaggcggcgcggtccaggtcgagcgcagcttgttctggggcgtattc
acgccgctgcggaacaatcagaccgatcccgacgattcgcgctacaccggcgcgatccgc
gccctcggcgtccgccatgtgctgttcgcgagcgacatcaactacatgccggcgtcgtcg
cagcaggcgacgttcgtcgatcgcggcatcgtgtgggccagttgggaaggaaacagcggt
gcggcgggcagcacgctcggcccggcccaggcggcgcaggtcccgttcgtctggcgcaac
ggcgttccctcgtacccgatgacgctgcatgggatcgatgagctcggcaacctgcgcgcc
tggatgggcgccggaaaggtgagcatgaccgcgcagcaatggatgcgggtcgtcaactag

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