KEGG   Lysobacter gummosus: LG3211_1198
Entry
LG3211_1198       CDS       T04163                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lgu  Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lgu02048]
    LG3211_1198 (hsdR)
Enzymes [BR:lgu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LG3211_1198 (hsdR)
Prokaryotic defense system [BR:lgu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LG3211_1198 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DUF2627
Other DBs
NCBI-ProteinID: ALN90174
LinkDB
Position
complement(1339687..1342983)
AA seq 1098 aa
MNDSAPDTREQVSAQLPALHLLVNLGWHYLGVADCLALRGGTREVLLKPRLIEVLQQRRF
DYKGERYPLSPSAIDQIVRELSALPLGEGLLAANEHLYAKLAFGITVTEFMPDGKKHQPT
IPIIDWVDPAANLWDVTEECDVLSMHGTHHRTPDIVGYVNGLPLMVIEAKRPESGHGGKA
MVVEGISQHLRNQRQDEIPQLYAYAQLLLSISQTDGRYGTTHTAAKFWARWREEQFDDAQ
LSMLKNRILPAATQDALFHDKPPRLRAYFASLWSQPMLPTDQDRLLAGLLTPGRMLEMLR
GFVLFDRKVGKVVARYQQFFGIRALLARIRQLRPDGGREGGVLWHTTGSGKSFTMVFLSK
ALLLEDALKECRVVVVTDRIDLETQLSRNFITGGAFGSSVATKKEGERSKATTGRDLAKR
IGHGSERITFSLVQKFNTASKLPECRNDSPNLIVLVDEGHRSHGGETHERMRKALPKAAY
IAFTGTPLLKDEKTSNKFGPIVHAYSMQRAVEDETVAPLLYEERVPELDINQEAVNRWFD
KITAGLSEAQSSDLKKKFASKRAVYGAANRIELIAWDIATHFDQNIKQLDLGLKGQVATD
SKQDAIRYKRALDETGLVSSAVVISAPDTREGNSEVDEDALPEVQKWWKQTIIDHRLDPE
QYEKDVLQNFGSDGDPDLLIVVDKLLTGFDEPRNAVLYIDKPLKGHNLIQAVARVNRLHD
AKRYGVLVDYRGILEELDTAVRAYQDLESRTQGGFDIADIEGLYQSFSTEYKQLPGLHDR
LWSFFRGVANRKDTEQYRQVLSPRFVSDGEGEEYDERQKLRDDFYAALTEFGLCLQTALS
SRNFFEDRSFSEDLIRRYKDDLRFFSDLRKIARRDAMETVDYSVYEEQIRRLVDKQVIGK
EVREPEGVYVVHQLGQAEDPETWSEDKTRNETDIIRTRVRRTIEQDLATDPYAQTVFGEL
LKQAIAEAEAMFEHPLKQYALFKKFADRLESLETPGIPNRFDGNRPAKAYYGVIRMTLGE
DVIEAMPESDRNQFIDLSFAIDKVVRDAVAENSLNPQSIEAAIRKKLLPDLFPRIGLDHA
RSAVEQIIQITRVGLSRE
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgaacgatagcgcccccgatacccgcgagcaggtcagcgcacaactacccgcactgcac
ttgttggtcaacctcggttggcactacctcggtgtcgctgattgtctggcgctacgcggc
ggtacccgcgaggtgctgctgaagccgcgtctgatcgaagtcctgcagcagcgacgcttc
gactacaagggcgagcgctatccgctgtcgcctagcgcaatcgaccagatcgtgcgtgaa
ctttcggcactgccgctgggcgagggtctgcttgctgctaacgaacacttgtacgccaag
ctggcattcggcatcaccgttaccgagttcatgcccgacggcaagaagcaccagcccacc
attccgatcatcgactgggtcgatccggccgccaacctgtgggatgtgactgaagagtgc
gatgtactgtccatgcacggcacgcaccaccgcacgccggacatcgtgggctatgtcaac
ggtcttccactgatggtgatcgaggccaagcgtccggaatccgggcatggcggcaaagcc
atggtggtcgagggcattagccagcacctgcgcaaccagcgccaggatgagattccgcag
ttgtacgcctacgcgcaactgctgttgtcgatcagccagaccgatggccgctatggcact
actcatactgcggccaagttctgggcacgctggcgagaggaacaattcgacgacgcgcag
ctgtccatgctcaagaaccgcatcctgccggcggccacgcaagacgcgctattccacgac
aagccgccgcgactgcgggcctacttcgcgtccttgtggtcgcaacccatgttgcccacg
gatcaggatcgcctgctggctggcttgctgacgccagggcggatgctggaaatgctgcgc
ggtttcgtgctgttcgatcgcaaggtcggcaaggtggtggcgcgctaccagcagttcttt
ggtattcgcgccctactagcgcggattcgccagctccgtcccgacggcggccgcgagggt
ggcgtgctctggcacaccaccggttcgggcaagagtttcacgatggtgttcttgagcaag
gcactgctactcgaggacgccttgaaagagtgccgggtagtggttgtgaccgaccgcatc
gacctggagacccaactctcgcgcaacttcatcaccggcggcgcgttcggttcatcggtc
gcgaccaagaaggagggcgagcgcagcaaggcaaccaccggtcgcgatctagccaagcgc
atcggtcacggcagcgaacgcatcaccttctcgctggtgcagaagttcaacacggcatcc
aagttgccggaatgccgtaatgattcgccaaatctgattgtcctggtggatgaaggtcac
cgcagccacggtggcgagactcatgagcgcatgcggaaggcattgccgaaagccgcctac
atcgcttttaccggcaccccgttgctgaaggacgaaaagacttccaacaagttcggcccg
atagttcacgcgtattcgatgcagcgggcggttgaggacgagacggtagcgccgctgcta
tacgaggagcgcgtgccggaattggacatcaatcaggaagcagtcaaccgctggttcgac
aagatcaccgctgggctatccgaggcgcaaagttcggacctgaagaagaagttcgccagc
aagcgcgccgtctatggcgccgccaaccgaatcgaactgatcgcctgggatatcgctaca
cacttcgaccagaacatcaaacaactagatctcggcctgaaggggcaggtcgcaaccgac
agcaagcaggacgcgatccgctacaaacgtgccctcgatgaaaccgggttggtcagtagt
gctgtggtgatctctgccccggacacccgcgagggcaatagcgaggtggacgaagatgcg
ctgcctgaggtgcagaaatggtggaagcagaccatcatcgatcataggctcgatccggag
cagtacgagaaggatgtgctgcagaacttcggcagcgacggcgatccggacttgttgatc
gtcgtcgacaagctgttgaccggcttcgacgaaccgcgcaatgccgtgctctacatcgac
aaaccgctcaaggggcacaacctgattcaggctgtggcgcgggtcaatcgtctgcatgac
gccaagcgctacggcgtgttggtggactatcgcggaatcctggaagagttggataccgcc
gtccgtgcctaccaagacttggagtcgcgaacccagggtgggtttgacatcgctgatatt
gaagggctctaccagtctttcagcacggagtacaagcagctgccgggactgcacgatagg
ttgtggtcgttcttcagaggcgtggccaaccgcaaggacacagagcagtaccgccaggtg
ctgagcccgcggttcgtctccgacggcgagggcgaggaatatgacgagcgccagaagctg
cgcgacgacttctatgcggcgctgaccgagtttggcctgtgcctgcagactgctttgtct
tcgcgcaacttcttcgaggaccgcagcttctccgaggacctgatccgccgctacaaagat
gacctgcgtttcttctctgacctgcgcaagatcgctcgtcgcgacgcgatggagactgtg
gactacagcgtctacgaggagcagatcagacggctggtggacaagcaggtcattggcaag
gaagtgcgcgagcccgaaggtgtgtatgtggtgcatcagctagggcaggctgaggatccg
gagacatggtccgaggacaagacccgcaacgaaaccgacatcattcgaacccgcgtgcgc
aggaccattgagcaggaccttgcgactgatccgtatgcgcagacagtcttcggtgaattg
ctgaaacaggctatcgccgaggctgaggcgatgttcgaacaccctttgaagcagtacgca
ttgttcaagaagttcgcggaccgcttggaaagtcttgaaactccaggcatccccaacagg
tttgatgggaatcgaccagctaaggcgtactacggggttatccggatgacgctgggcgag
gacgtgatcgaggccatgccagagtccgacaggaaccagttcattgatctctccttcgcg
atcgacaaagtggtgcgcgatgccgtcgcagagaactcgctgaatccgcagagcatcgag
gcggcgattcgcaagaagctgttgccggacctttttccgcggataggactggaccatgcg
cgatcggcggtcgagcagatcattcagatcaccagggttgggcttagccgcgaatga

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