Lysobacter gummosus: LG3211_1320
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Entry
LG3211_1320 CDS
T04163
Name
(GenBank) pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00300
Lysine biosynthesis
lgu00470
D-Amino acid metabolism
lgu01100
Metabolic pathways
lgu01110
Biosynthesis of secondary metabolites
lgu01120
Microbial metabolism in diverse environments
lgu01230
Biosynthesis of amino acids
Module
lgu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LG3211_1320
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LG3211_1320
Enzymes [BR:
lgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LG3211_1320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALN90295
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All DBs
Position
1469380..1470606
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AA seq
408 aa
AA seq
DB search
MNPAIAAAIGQLRAQSSDGVCAYVYDLASLQAHARWMKSCLPQGYELYYAAKANAEAPVL
QTLAPWMDGFEAASGGELRWLHEQQPGRPLLFGGPGKLDSELAQAVSLPDCTVHVESLGE
LQRLARIAASASRTVQVFLRMNITVPGIRDTRLMMGGKPTPFGLDEDALPQAVQCLRENP
RLRLEGFHFHLMSHQRDVAMQLELVQAYVRTVVLWRERYGLDVRTVNAGGGFGIDYADHA
NSFDWQAFCEGLRELSLPERHGLRIRFEPGRFVSVACGYYVMEVIDIKRSYGEHFAVARG
GTHHFRTPAAQSHDHPFHVLRGDGAPTLLQEKVTLVGQLCTPKDVLARGQAVEALAVGDC
LVFPLAGAYAWNISHQNFLMHPPPRMVFLEPGAVPPTMPASHEVALTA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggctatcgccgccgccatcgggcaactgcgcgcgcaatcgagcgacggcgtc
tgcgcctacgtctacgacctggcctcgctgcaggcgcatgcgcgctggatgaagtcctgc
ctgccgcaaggctacgaactctattacgccgccaaggccaatgccgaggccccggtgctg
caaacgctggcgccgtggatggacggcttcgaggccgcttccggcggcgagctgcgctgg
ctgcacgaacaacagcccggccgcccgctgttgttcggcggcccgggcaagctcgacagc
gagctcgctcaggcggtgtccttgcccgattgcaccgtgcacgtcgaaagcctgggcgaa
ctgcagcggctggcgcgcatcgccgcgtcggcgagccggaccgtgcaagtgttcctgcgc
atgaacatcaccgtgcccggcatccgcgacacccgcctgatgatgggcggcaaaccgacg
ccgttcggactcgacgaggatgcgttgccgcaggcggtgcaatgcctgcgcgagaatccg
cggctgcgcctggagggcttccacttccacttgatgtcgcatcaacgcgacgtggccatg
cagctggagctggtgcaggcctatgttcgcacagtggtgctgtggcgcgagcgctacggc
ctggacgtgcgcacggtcaatgccggcggcgggttcggtatcgactacgccgaccacgcg
aattcgttcgactggcaggccttctgcgagggcttgcgcgaactgtcgctgcccgagcgg
cacggcctgcgcatccgcttcgagcccggccgcttcgtcagcgtcgcctgcgggtactac
gtcatggaagtgatcgacatcaagcgcagctatggcgagcatttcgccgtcgcgcgaggc
ggcacccatcacttccgcacgccggctgcgcagagccacgaccatcccttccatgtgctg
cgcggcgacggcgcgccaacgctgctacaggagaaggtcaccctggtcgggcagctgtgc
acgcccaaggacgtgttggcgcgcgggcaggcggtcgaggcattggcggtgggcgattgc
ctggtgtttccgctcgccggcgcctatgcctggaatatttcgcatcagaacttcctgatg
catccgccgccgcggatggtgttcctcgaacccggtgcggtgccgccgacgatgccggcc
tcgcatgaggttgcgcttactgcttga
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