Lysobacter gummosus: LG3211_1607
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Entry
LG3211_1607 CDS
T04163
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG3211_1607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_1607
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LG3211_1607
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LG3211_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALN90583
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All DBs
Position
1773123..1773812
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AA seq
229 aa
AA seq
DB search
MPRHIRGFDAPTAHAYLSKRDRKLGAWMKKVDRLENGPIPTDPRWRQKFDPVDALARAIL
FQQLSGKAASTIVGRVETAIASTRLHFDTLGRCDDATLRGCGVSGNKLLALRDLAAREER
GEIPDLRRMSTMDNDAIIAALVPIRGIGRWTVEMMLMFRLGRPDILPVDDLGIRKGAQRV
DQLDAMPAPKVLAETGERWGPYRSYASLYLWRIADIADGPKTKVNRSQD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacacatccgtggattcgatgcgccgaccgcgcacgcgtacctgagcaagcgc
gaccgcaagctcggggcgtggatgaagaaagtggatcggttggagaacgggccgatcccg
accgatccgcgctggcggcagaagttcgacccggtcgatgccttggcgcgggcgatcttg
ttccagcagctcagcggcaaggccgcatcgaccatcgtcggccgggtcgagaccgcgatc
gccagcacgcgcctgcatttcgacaccctgggccgttgcgacgacgcgaccttgcgcggt
tgcggcgtgtccggcaacaagctgctggcgctgcgcgatctggccgcgcgcgaggagcgc
ggggagattcccgatctgcgccgcatgtccacgatggacaacgacgcgatcatcgccgcg
ctggtgccgatccgcggcatcggccgctggacggtggaaatgatgctgatgttccgcctg
ggccgcccggacattctgccggtggacgacctgggcatccgcaagggcgcgcagcgggtg
gaccaactcgatgcgatgccggcgccgaaggtcttggccgaaaccggcgagcgctggggg
ccgtatcgcagctatgcgagcttgtatctgtggcggatcgcggatatcgccgatgggccg
aagaccaaggtcaatcggtcgcaggattga
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