Lysobacter gummosus: LG3211_1719
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Entry
LG3211_1719 CDS
T04163
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03030
DNA replication
lgu03430
Mismatch repair
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG3211_1719 (dnaX)
03430 Mismatch repair
LG3211_1719 (dnaX)
03440 Homologous recombination
LG3211_1719 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_1719 (dnaX)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_1719 (dnaX)
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG3211_1719 (dnaX)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG3211_1719 (dnaX)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG3211_1719 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
DNA_pol3_tau_5
AAA_5
AAA_14
Mg_chelatase
AAA_18
PIF1
AAA_assoc_2
DUF7194
AAA_30
AAA_7
nSTAND3
DUF3646
TsaE
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ALN90693
LinkDB
All DBs
Position
1879528..1881981
Genome browser
AA seq
817 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALSTGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCERGTSADPCGECNACLDIDAGRYIDLLEIDAASNTGVDDVREVIDNAQYMPSRGRV
KVYLIDEVHMLSKSAFNALLKTLEEPPGHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
QQIAGQMTRILAAEQIPVEESAIRQLAKAADGSLRDGLSLLDQAIAYGGAGADAPLEGAS
VAAMLGSVDRTRVGAVLTALADGDGQRLLDEVATLAEFSPDWGSVLETVGDALHRIQVRQ
LVPEAAIEADGVDVDALAAQLRPELVQLWYQMSVNGRRDLPLAPSPRAGFEMSVLRMLAF
RPSGAGDAPATPSGSGSGAAAGSGSGSGSGSRGESARSASAAAQAAAAMREMGGAASRQA
SSEPAAPPREVVAQPPPREVAVAKPAAPARANPFEDDPRDAPPWQMPAPAAKPAAATRAN
PFEDDPRDAAPSSLKPAAAVPPNPFQDDPRDTAPAQPAPKPAAAALSNPFQDDPRDAPPW
QTPPPKPAAAAEPARASLDQAPPREPQTDTRNAAPRREAPLWPDEDPVREPLRDHNPDPA
PQRAAPPLSLDPEPPQRSADAAPPARNGADADHARAAAMQAPGPAQAAPIQAEPAHREPP
RDDIFGASAPAAITMPPRPAATASAGVGIADDMAWHAIVDASGLRGPSRILAEHAGFVSY
ADGVLTLALGPNDEHLKAPALIKMVADSLAARLGVAPQIRFEAAQAGESLHARNQRARDQ
RQANAEDMFMNDPDVRRLIDDYGAKVVPDSIRPLDEA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtcctcgcccgcaaatggcgccccaagcgtttcgccgaactggtcggg
caggaacacgtggtccgcgcgctgaccaatgcgctcagcaccgggcgcgtgcaccacgcc
ttcctgttcaccggtacacgcggcgtcggcaagaccacgatcgcgcgcatcttcgccaaa
tcgctgaactgcgagcgcggcacctcggccgacccctgcggcgagtgcaacgcctgcctg
gacatcgacgccggccgctacatcgacctgctcgagatcgacgccgccagcaacaccggc
gtggacgacgtgcgcgaggtgatcgacaacgcccagtacatgcccagccgcggtcgggtg
aaggtctatctgatcgacgaagtgcacatgctgtccaagtcggcgttcaacgcgctgctc
aagaccctggaagagccgccggggcacgtgaaattcctgctcgcgaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgtctgcagttcaacctcaagcgcctggacgag
cagcagatcgccgggcagatgacccgcatcctcgccgccgagcagattccggtcgaggaa
tcggcgatccgccagctcgccaaggccgccgacggcagcctgcgcgacggtctgtcgctg
ctcgaccaggccatcgcctacggcggcgccggtgccgatgcgccgctggaaggcgcatcg
gtcgccgcgatgctcggttcggtcgaccgcacccgggtcggggcggtgctgaccgccctg
gccgacggcgacggccagcgcctgctcgatgaagtcgcgaccctggccgagttttcgccg
gactggggcagcgtgctggaaaccgtgggcgatgccttgcaccgcatccaggtgcggcag
ctggtgccggaggcggcgatcgaggccgacggcgtggatgtcgatgctctggcggcgcag
ttgcggccggaactggtccagctttggtatcagatgagcgtcaacggccgccgcgatctg
ccgctggcgccgagcccgcgcgctggtttcgagatgagcgtgctgcgcatgctcgcgttc
cgtccgagcggggcaggcgatgcgccggctacgccttcgggctcgggctcgggcgccgcc
gccggttctggctcgggttcgggttcgggtagccgcggcgagtccgcgcgcagcgccagt
gcagccgctcaggcggccgcggcgatgcgcgagatgggtggcgccgcgtcgcgtcaggca
tcgagcgagcccgcagcaccgccgcgcgaggtcgtcgcacaaccgccgccgcgcgaagtg
gcggtcgccaagccggccgcgccggcacgggcgaatcctttcgaagacgacccgcgcgac
gcgccgccgtggcagatgccggcgccggcggcgaaaccggccgccgcgacgcgtgcgaac
ccgttcgaagacgatccgcgcgatgccgcgccgtcgtccttgaagccggccgccgcagtg
ccgccgaacccgttccaggacgatccgcgcgacaccgcgccggcgcagccagcgccgaag
ccggccgccgcagcgctgtcgaacccgttccaggacgatccgcgcgacgcaccgccgtgg
cagacgccgccgccgaagccggcggctgcggccgaacccgcgcgcgcatcgctcgatcaa
gcgccgccgcgcgagccgcagaccgatacgcgcaacgccgcgccgcgtcgcgaagcgccg
ttatggcccgacgaagaccccgtgcgcgaaccgctgcgcgatcacaaccccgatccggcg
ccgcaacgcgccgcgccgccgctgtcgctcgatcccgagccgccgcagcgcagcgccgat
gccgcgccgccggcccgcaacggcgccgatgccgatcacgcgcgagccgcggcgatgcag
gcaccggggccggcccaggccgcgcccatccaagccgaacccgcgcatcgcgaaccgccg
cgcgacgacatcttcggcgcatccgcgccggccgcgatcaccatgccgccgcgccccgcc
gcgacggcgagcgcgggcgtcggcatcgccgacgacatggcctggcacgcgatcgtcgat
gccagcggcttgcgcggtccgtcgcgcatcctcgccgaacatgccggcttcgtcagttat
gccgacggcgtgctgaccttggcgctgggcccgaacgatgagcacctcaaggcgccggcg
ctgatcaagatggtcgccgactcgctggccgcgcgcctgggcgtcgcgccgcagatccgc
ttcgaggcggcccaggccggcgaatcgctgcacgcgcgcaaccagcgcgcccgcgaccag
cgccaggccaatgccgaggacatgttcatgaacgatcccgacgtgcgccgtctgatcgac
gattacggcgccaaggtcgtgcccgattcgatccggcccctcgacgaggcctga
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