Lysobacter gummosus: LG3211_1743
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Entry
LG3211_1743 CDS
T04163
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03030
DNA replication
lgu03430
Mismatch repair
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG3211_1743 (holB)
03430 Mismatch repair
LG3211_1743 (holB)
03440 Homologous recombination
LG3211_1743 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_1743 (holB)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_1743 (holB)
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG3211_1743 (holB)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG3211_1743 (holB)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG3211_1743 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
EAD7
Motif
Other DBs
NCBI-ProteinID:
ALN90717
UniProt:
A0ABY3XHV8
LinkDB
All DBs
Position
1902339..1903313
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AA seq
324 aa
AA seq
DB search
MSAVFAPWQQRIYDQAKASIGAGRLGHGLLFCGPAQLGKRAVAERLAHGLLCRERSAQGD
PCGRCRSCLLLAAGTHPDYQLVSFVPNKEGTRLRTEIVIEQIRNLSERLALTPQYGGAQI
AIIDPADSINTAACNALLKTLEEPVPGRYLWLVSSHPARLPATIRSRCQRLEFRLPQPEE
ALAWLQAQGHGDAATREAFDAARGHPGLAHEWLSGDGLKLRREVAADLSKLARGETSAPE
VAQRWTGDEHAALRLRHASDIALAEAASGLTDPARARSLATWFDRANRTRDLLRTTVRAD
LAVVELLMAWRADESRRAGSGSRA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgttcgcgccctggcagcaacgtatctacgatcaggccaaggcctccatc
ggcgccggccgcctgggccacggcctgctgttctgcggcccggcgcagttgggcaagcgc
gcggtcgccgagcgtctggctcacggcctgctgtgccgcgagcgcagcgcccagggcgat
ccctgcggccgctgccgcagctgcctgctgctggcggccggaacccatccggactatcaa
ctggtcagcttcgttccgaacaaggaaggcacgcggctgcgcaccgagatcgtgatcgag
cagatccgcaatctgtccgagcgcctggcgctgacgccgcaatacggcggcgcccagatc
gcgatcatcgatccggccgattcgatcaataccgccgcctgcaacgccttgctcaagacc
ctggaagagccggtgccgggtcgttatctgtggctggtgagctcgcacccggcgcgcctg
ccggcgacgatccgcagccgctgccagcgcctggaattccgtctgccgcagccggaggag
gcgctggcgtggctgcaagcgcagggccatggcgacgccgccacccgcgaagccttcgac
gccgcgcgcggacatccgggcctggcgcacgaatggttgagcggcgacgggctcaagctg
cgccgcgaagtcgccgccgatctgagcaagctagcgcgcggcgagacctcggcgccggaa
gtcgcgcagcgctggaccggcgacgagcacgcggccctgcgtctgcgacacgcgtcggac
atcgcgctcgccgaggccgcttccggcttgaccgacccggcgcgcgcgcgcagtcttgcg
acttggttcgatcgcgccaaccgaacccgcgacctgttgcgaaccacggtgcgcgcggat
ctggcggtagtggaattgttgatggcctggcgcgcggacgaaagccgccgcgccgggtca
gggagcagggcatga
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