Lysobacter gummosus: LG3211_2220
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Entry
LG3211_2220 CDS
T04163
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgu03016
]
LG3211_2220 (truB)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LG3211_2220 (truB)
Transfer RNA biogenesis [BR:
lgu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LG3211_2220 (truB)
Prokaryotic type
LG3211_2220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALN91187
UniProt:
A0ABY3XJ07
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All DBs
Position
2421963..2422892
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AA seq
309 aa
AA seq
DB search
MNTTRKRNWRNVDGLLLLDKPQGLSSNQALQQARHLFRAEKGGHTGSLDPLATGLLPLCF
GEATKIAGLLLGARKAYTTTAVLGLTTDSDDADGAPLLERPVPELDDATIEAALAPLRGA
IRQRAPIYSALKQGGEPLYAKARRGEAIEAPERDVIVHSLALTGRDGPRLELHVECGSGT
YVRSLVRDLGETLGCGAHVSVLRRLWVEPFMQPRMVTLEQLRELAAQGNDLALDAHLLPI
EAGLSEFARVSIDAASAHRLGQGQAVTCEEGEAGLVAIFGEAGRCLGLGLRQAEGRLQPQ
RLFRWAAQG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgacgcgtaaacgcaattggcgcaacgtcgacggcttgttgctgctcgacaaa
ccgcaaggcctgagttccaaccaggccctgcaacaggcgcgccacctgttccgcgccgaa
aagggcgggcacaccggcagcctggacccgctggcgaccggactgctgccgctgtgcttc
ggcgaggcgaccaagatcgccggcctgctgctcggcgcgcgcaaggcctacaccaccacc
gccgtgcttggcctgaccaccgacagcgacgatgccgacggcgcgccgctgctcgaacgc
ccggtgcccgagctcgacgacgccaccatcgaagccgcgctcgcgcccttgcgcggagcg
atccgccagcgcgcgccgatctattccgcgctcaagcagggcggcgagccgctgtatgcc
aaggcccgccgcggcgaggccatcgaggcgcccgagcgcgacgtgatcgtgcattcgctg
gccctgaccggccgcgacggcccgcgcctggaactgcacgtggaatgcggatcgggcacc
tacgtgcgcagcctggtccgcgacctgggcgaaaccctcggctgcggcgcccacgtcagc
gtgctgcgccggctgtgggtcgagccgttcatgcagccgcgtatggtcaccctggagcaa
ctgcgcgaactggccgcacagggcaacgatctggcgctggacgcccatctgctgccgatc
gaagcgggcctgagcgaattcgcccgagtctcgatcgacgccgcctccgcccatcggctg
ggccagggccaggcggtcacgtgcgaagagggcgaggccgggctggtggcgatcttcggc
gaagccggccgctgcctgggcctgggcctgcgtcaggccgagggccgcctgcagccgcag
cggctgttccgctgggcggcgcagggctga
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