Lysobacter gummosus: LG3211_2341
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Entry
LG3211_2341 CDS
T04163
Symbol
fadD
Name
(GenBank) fadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00061
Fatty acid biosynthesis
lgu00071
Fatty acid degradation
lgu01100
Metabolic pathways
lgu01212
Fatty acid metabolism
lgu02024
Quorum sensing
lgu04146
Peroxisome
Module
lgu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LG3211_2341 (fadD)
00071 Fatty acid degradation
LG3211_2341 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LG3211_2341 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LG3211_2341 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lgu01004
]
LG3211_2341 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgu04147
]
LG3211_2341 (fadD)
Enzymes [BR:
lgu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LG3211_2341 (fadD)
Lipid biosynthesis proteins [BR:
lgu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LG3211_2341 (fadD)
Exosome [BR:
lgu04147
]
Exosomal proteins
Exosomal proteins of breast milk
LG3211_2341 (fadD)
Exosomal proteins of breast cancer cells
LG3211_2341 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ALN91308
LinkDB
All DBs
Position
complement(2556830..2558509)
Genome browser
AA seq
559 aa
AA seq
DB search
MSFERPWLAHYPQGVPAQIDVEEFPSVVSVLENAIENYRDRPAFSNFGKQLTYADIDRLS
AQFAAYLLGELKLKKGDRVAIMMPNCLQYPIATFGVLRAGLTVVNTNPMYTPRELKHQLD
DSGAKVIFVLDNFGKTVQDVVAGTDVKVIATGLGDMIGGLKGPIMNFVLKYVKKMVPDYD
IPGAVRFRDTLTLGQMHKLPEIEIAPGDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAA
AWVGANAKLGEEIIITALPLYHIFALTANGLVFMKFGGLNHMITNPRDMPAFVKELKNTP
FTAITGVNTLFNGLLNTPGFSEVDFSKLHLTLGGGMAVQRSVAERWKQVTGITLIEAYGL
TETSPAACINPMDLPEYNGSIGLPISSTDACVKDEEGRILPMGEVGELCIKGPQVMKGYW
QKPEETAKVIDQDGWLHTGDMAKMDEKGFFYIVDRKKDMILVSGFNVYPNEIEDVIAMMP
GVLEVAAVGVPDDKSGEAVKVVIVKKDPALTAEDVKAHARANLTGYKHPKFVEFRKELPK
TNVGKILRRELRDAPPSGH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgaacgtccgtggcttgcccactatccgcaaggcgtgccggcgcagatcgac
gtggaggagtttccttccgtggtatcggtgctggaaaacgcgatcgagaattaccgcgac
cgcccggctttctccaatttcggcaagcagctgacctacgcggacatcgaccgcctcagc
gcccagttcgccgcctacctactcggcgagctcaagctcaagaagggcgatcgcgtcgcg
atcatgatgcccaactgcctgcaatacccgatcgcgaccttcggcgtgctgcgcgccggc
ctgaccgtggtcaacaccaatccgatgtacaccccgcgcgagctcaagcatcagctcgac
gactccggcgcgaaggtgatcttcgtgctcgacaacttcggcaagaccgtgcaggacgtg
gtcgccggcaccgacgtgaaggtcatcgccaccggcctgggcgacatgatcggcgggctc
aagggcccgatcatgaacttcgtgctgaagtacgtgaaaaagatggtgcccgactacgac
atcccgggcgcggtgcgcttccgcgacacgctcaccctggggcagatgcacaagctgccc
gagatcgagatcgcgccgggcgacatcgctttcctgcagtacaccggcggcaccaccggc
gtcgccaagggcgcgatgctgacgcaccgcaacctggtggcgaacatgcagcaggcggcg
gcctgggtcggcgccaacgccaagctgggcgaggaaatcatcatcaccgcgctgccgctg
tatcacatcttcgcgttgacggcgaacggcctggtcttcatgaagttcggcgggctcaac
cacatgatcaccaacccgcgcgacatgccggcgttcgtgaaggagctcaagaacaccccg
ttcaccgcgatcaccggcgtcaacacgctgttcaacggcctgctcaacacgccgggtttt
tccgaggtcgatttctccaagctgcacctgaccctgggcggcggcatggccgtgcagcgt
tcggtcgccgagcgctggaagcaggtcaccggcatcaccctgatcgaggcctacggcctg
actgaaacctcgccggcggcctgcatcaatccgatggacctgcccgagtacaacggctcg
atcggcctgccgatctcctccaccgacgcctgcgtcaaggacgaggaaggccgcatcctg
ccgatgggcgaagtcggcgagctgtgcatcaagggcccgcaggtgatgaagggttactgg
cagaagccggaggagaccgccaaggtcatcgatcaggacggctggctgcacaccggcgac
atggccaagatggacgagaagggcttcttctacatcgtcgatcgcaagaaggacatgatc
ctggtctcgggcttcaacgtgtaccccaacgagatcgaggacgtcatcgcgatgatgccc
ggggtgctggaagtcgccgcggtcggcgtgcccgacgacaagtccggcgaggcggtcaag
gtggtcatcgtcaagaaggacccggcgctcaccgccgaggacgtcaaggcccatgcgcgc
gccaatctgaccggctacaaacaccccaagttcgtcgaattccgcaaggaactgcccaag
accaacgtcggcaagatcctgcgccgggagctgcgcgacgcgccgccgtccggacactga
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