Lysobacter gummosus: LG3211_2376
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Entry
LG3211_2376 CDS
T04163
Name
(GenBank) sigma-54 interaction domain protein
KO
K07478
putative ATPase
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LG3211_2376
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_16
AAA_22
Mg_chelatase
RCF1-5-like_lid
ResIII
Cdc6_lid
nSTAND3
AAA_30
AAA_14
Sigma54_activat
AAA_25
DUF815
AAA_28
AAA_3
RNA_helicase
ATPase_2
AAA_18
TIP49
NPHP3_N
ABC_tran
AAA_11
AAA_24
Sigma54_activ_2
IstB_IS21
Rad17
AAA_17
NACHT
Viral_helicase1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ALN91343
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All DBs
Position
2591490..2592866
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AA seq
458 aa
AA seq
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MARRTAPSQDSRDLLSVDNDGLRPLAERMRPRSVDEMVGQRRLLAPGSALRRAVESGRVH
SMILWGPPGCGKTTLALLLARYADAEFKAISAVLSGLPEVRQVLAEAAHRFADGRRTVLF
VDEVHRFNKTQQDAFLPHIERGTIIFVGATTENPSFELNSALLSRCRVHVMEAVSPDDIR
HSLRRALEDEERGLGAQPVQVGDDLLLQIATAADGDVRRALTLLEIAAELAADEDGQITA
ATLAQVLADRTRRFDKGGEQFYDQISALHKSVRSSNPDAALYWFARMLDGGCDPHYLARR
LTRMAVEDIGLADPRALQMSVDAWDTYDRLGSPEGDLALAQVVIYLASTAKSNAAYAAFN
AAKADVVEHGTQDVPLHLRNAPTKLMKQLGYSKGYQYDHDADGGIALDQTGFPDAMGERV
YYQPVERGLELKLGEKLARLRAQRAQARGEGGEGGEGG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgtcgaaccgccccctcgcaggactcgcgcgatctgctcagcgtcgataacgac
ggcctgcgtccgctggccgagcgcatgcgcccgcgcagcgtggatgaaatggtcggccag
cgccgcctgctcgcgcccggctcggcgctgcgccgcgcggtcgaatccggacgcgtgcat
tcgatgatcctgtggggcccgccggggtgcggcaagaccaccctggcgttgctgctggcg
cgctacgccgatgccgagttcaaggcgatctcggccgtgctctcgggcctgcccgaagtg
cggcaagtgctggccgaggccgcgcaccgtttcgccgacggccgccgcacggtgttgttc
gtggacgaggtgcatcgcttcaacaagacccagcaggacgcgttcctgccgcatatcgag
cgcggcaccatcatcttcgtcggtgcgaccaccgagaacccgtcgttcgagctcaactcg
gcgctgctgtcgcgctgccgcgtgcacgtgatggaagcggtctcgcccgacgacatccgc
cacagcctgcggcgcgcgctggaagacgaagagcgcggcctgggcgcgcagccggtgcag
gtcggcgacgacttgctgctgcagatcgccaccgccgccgacggcgacgtccgccgtgcg
ctgaccttgctggaaatcgccgccgaactggccgccgacgaagacgggcagatcaccgcc
gcgaccctggcgcaggtgctggccgaccgcacccgccgcttcgacaagggcggcgagcag
ttctacgaccagatttcggcgctgcacaaatccgtgcgcagctccaaccccgacgccgcg
ttgtactggttcgcgcgcatgctcgacggcggctgcgacccgcattacctggcgcggcgg
ctgacccgcatggcggtggaggacatcggtctggccgatccgcgcgcgctgcagatgtcg
gtcgatgcctgggatacctacgaccgcctgggcagcccggaaggcgatctggccctggcg
caggtggtgatctatctggccagcaccgccaagtccaacgccgcctatgccgccttcaac
gcggccaaggccgatgtggtcgagcacggcacccaggatgttccgctgcacctgcgcaat
gcgccgaccaagctgatgaagcagttggggtattcgaagggttaccagtacgaccacgac
gccgacggcggcatcgccctggatcagaccgggttcccggatgcgatgggcgagcgggtg
tattaccagccggtggagcgtgggctggagctcaagctcggcgagaagctcgcgcggttg
cgggcgcaacgcgcgcaggcgcgcggcgagggcggcgagggcggcgagggcgggtga
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