KEGG   Lysobacter gummosus: LG3211_2723
Entry
LG3211_2723       CDS       T04163                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lgu  Lysobacter gummosus
Pathway
lgu00010  Glycolysis / Gluconeogenesis
lgu00020  Citrate cycle (TCA cycle)
lgu00260  Glycine, serine and threonine metabolism
lgu00280  Valine, leucine and isoleucine degradation
lgu00310  Lysine degradation
lgu00380  Tryptophan metabolism
lgu00620  Pyruvate metabolism
lgu00630  Glyoxylate and dicarboxylate metabolism
lgu00640  Propanoate metabolism
lgu00670  One carbon pool by folate
lgu00785  Lipoic acid metabolism
lgu01100  Metabolic pathways
lgu01110  Biosynthesis of secondary metabolites
lgu01120  Microbial metabolism in diverse environments
lgu01200  Carbon metabolism
lgu01210  2-Oxocarboxylic acid metabolism
lgu01240  Biosynthesis of cofactors
Module
lgu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lgu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lgu_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lgu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lgu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LG3211_2723 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LG3211_2723 (lpdA)
   00620 Pyruvate metabolism
    LG3211_2723 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LG3211_2723 (lpdA)
   00640 Propanoate metabolism
    LG3211_2723 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LG3211_2723 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LG3211_2723 (lpdA)
   00310 Lysine degradation
    LG3211_2723 (lpdA)
   00380 Tryptophan metabolism
    LG3211_2723 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LG3211_2723 (lpdA)
   00670 One carbon pool by folate
    LG3211_2723 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lgu04147]
    LG3211_2723 (lpdA)
Enzymes [BR:lgu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LG3211_2723 (lpdA)
Exosome [BR:lgu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LG3211_2723 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA HI0933_like AlaDh_PNT_C FAD_binding_2 3HCDH_N FAD_oxidored Pyr_redox_3 DAO FAD_binding_3 Thi4 NAD_binding_8 Lycopene_cycl 2-Hacid_dh_C Amino_oxidase XdhC_C
Other DBs
NCBI-ProteinID: ALN91690
LinkDB
Position
3049463..3050887
AA seq 474 aa
MSEQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQFWNLQHLFGEHGISADNAKIDVATMVGRKDKIVKQFTGGIAMLFKANKITPYYG
FGTLHPGNIVKVKQHDGSEVELKGTNVIIAAGSDSIELPFAKFDGDKIVDNVGALDFTEV
PKRLGVIGAGVIGLELGSVWKRLGSEVTILEALPDFLAAADAEVAKTAAKEFKKQGLDIK
LGAKVSKAEIKKDGVHLTYNDGKSDQELVVDKLLVAVGRRAASKGLLAEGTGVKINERGQ
IEVDEHCHTGVDGVWAVGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNLDTVPWVIYTE
PEIAWVGKTEQQLKAENIPYKTGSFPFAAIGRAVAMGEPAGFVKVIAHAETDRVLGLHLV
GVGVSELVHEGVLTMEFNGSADDLARICHAHPTLSEAIHDAAMAVDKRAIHKAN
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcgaacaattcgacgtagtcgtcatcggcgccggccccgccggctatcacgccgcc
atccgcgccgcacagctcggtctgaagaccgcgtgcatcgacgccgcgctgggcaaggac
ggcaagccggcgctgggcggcacctgcctgcgcgtgggctgcattccgtccaaggcgctg
ctcgacagctcgcgccagttctggaacctgcagcacctgttcggcgaacacggcatcagc
gccgacaacgccaagatcgacgtcgccaccatggtcggccgcaaggacaagatcgtgaag
cagttcaccggcggcatcgcgatgctgttcaaggcgaacaagatcaccccgtactacggc
ttcggcaccctgcacccgggcaacatcgtcaaggtcaagcagcacgacggttccgaggtg
gaactcaagggcaccaacgtcatcatcgccgccggttcggattccatcgaactgccgttc
gccaagttcgacggcgacaagatcgtcgacaacgtcggcgcgctggacttcaccgaggtc
cccaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaactgggcagcgtgtgg
aagcgcctgggctcggaagtcaccattcttgaagcccttcccgacttcctcgccgccgcc
gatgccgaggtcgccaagaccgcggccaaggaattcaagaagcagggcctggacatcaag
ctcggcgcgaaggtcagcaaggccgagatcaagaaagacggcgtgcacctgacctacaac
gacggcaagtccgatcaggaactggtcgtggacaagctgctggtggccgtcggccgccgc
gcggcgtcgaaaggcctgctggccgaaggcaccggcgtcaagatcaacgagcgcggccag
atcgaagtcgatgagcattgccacaccggcgtcgatggcgtgtgggcggtcggcgactgc
gtgcgcgggccgatgctggcgcacaagggcttcgaggaaggcatcgcggtcgccgaactc
atcgccggcctgccgggccacgtcaacctcgacaccgtgccgtgggtgatctacaccgag
ccggaaatcgcctgggtcggcaagaccgagcagcagctcaaggccgagaacattccgtac
aagaccggcagcttcccgttcgcggcgatcggccgcgcggtggccatgggcgagccggcc
ggcttcgtcaaggtcatcgcccatgccgagaccgaccgtgtgctgggcctgcatctggtc
ggcgtcggcgtgtccgagctcgtccacgaaggcgtgctgaccatggagttcaacggctcc
gccgacgacctcgcccgcatctgccacgcccatccgaccctgtcggaagcgatccacgat
gcggcgatggcggtggacaagcgggcgattcacaaggccaactga

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