Lysobacter gummosus: LG3211_2858
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Entry
LG3211_2858 CDS
T04163
Name
(GenBank) radical SAM superfamily protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00860
Porphyrin metabolism
lgu01100
Metabolic pathways
lgu01110
Biosynthesis of secondary metabolites
lgu01240
Biosynthesis of cofactors
Module
lgu_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LG3211_2858
Enzymes [BR:
lgu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
LG3211_2858
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Motif
Pfam:
Radical_SAM
HemN_C
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ALN91824
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Position
3203130..3204512
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AA seq
460 aa
AA seq
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MNAIAQPAALHRLADLLRLPPYQAYSYSYPHKTAYRPLQPAQSLAQLWADEPRDALFLYL
HIPFCSYRCGFCNLFALARPEPAKVAAYLQQMEHQLRATAAALGEHRFVRFALGGGTPTY
LDTEQLRRVFDLVERHAAIDLQAVPAGIEVSPETVDLEKLRLCRERGIDRVSMGIQSFSD
AEVRTLVRPQQRAVVEQAIAAIREAGIATMNLDLIYGIAGQTRESFLASIDSALAHSPEE
LYLYPLYVRPLTGLGRIEAKNGARGGFALQAEPVDDRLALYEAGRERLLAAGYSQVSMRM
FRAPHAPELSGPVYCCQSDGMVGIGCGARSYTSALHYSSEYGVARRSVAEILDHYLARDE
ASFASADYGIRLSADDRRRRHAIQSLLIRPGLDRADYRRHFSADCLDDLPQLRELFELGL
AVADDNLIELTQAGLARADTIGPWLTSAQIAERMHDYRLG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatcgcccaacccgccgcgctgcaccgtctcgccgatctgctgcgcctgccg
ccgtatcaggcgtactcgtattcgtatccgcacaagaccgcgtaccggccgctgcagccg
gcgcaatcgctggcgcagctgtgggcggacgaaccccgcgacgccttgttcctgtacctg
cacatcccgttttgttcctaccgctgcggcttttgcaatctgttcgcgctggcgcggccg
gagccggccaaggtcgcggcctatctgcagcagatggaacaccagttgcgcgccaccgcg
gcggcgctgggcgagcatcgcttcgtgcgcttcgccctcggcggcggcacgccgacctat
ctcgacaccgagcaattgcggcgcgtgttcgatctggtcgagcgccatgccgcgatcgat
ctgcaggccgtgcccgccggcatcgaggtgtcgccggaaaccgtcgatctcgaaaaactg
cgcctgtgccgcgagcgcggcatcgaccgcgtcagcatgggcatccagagtttcagcgac
gccgaggtgcgcacgctggtgcggccgcaacagcgcgccgtggtcgaacaggcgatcgcc
gcgatccgcgaagccggcatcgccaccatgaatctggacctgatctacggcatcgccggc
cagacccgcgagagtttcctcgcgtccatcgacagcgcgctggcgcattctccggaagaa
ctctatctgtatcccttgtacgtgcgcccgctgaccggcctgggccggatcgaagccaag
aacggcgcgcgtggcggtttcgccctgcaggccgaaccggtggacgatcgcctggccctg
tacgaagccggccgcgaacgcctgctcgcggccggttacagccaggtgtcgatgcgcatg
ttccgcgcgccgcacgcgccggagctgagcgggccggtgtactgctgccagagcgacggc
atggtcggcatcggttgcggcgcgcgttcctacacctcggccctgcactactccagcgaa
tacggcgtggcgcggcgcagcgtcgcggagatactcgatcactacctcgcccgcgacgaa
gcctccttcgccagcgccgactacggcatccgcctgagcgccgacgatcgccgccgccgg
cacgcgatccagtcgctgctgatccgcccgggcctggatcgcgccgactatcgccgccat
ttcagcgccgattgcctggacgatctgccgcaactgcgcgaattgttcgaactcggcctg
gccgtggccgatgacaacctgatcgaactgacccaggccggcctcgcccgcgccgacacc
atcggcccatggctgacttcggcgcagatcgccgaacgcatgcacgactacaggttgggc
tga
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