Lysobacter gummosus: LG3211_2911
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Entry
LG3211_2911 CDS
T04163
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_2911 (ihfB)
03036 Chromosome and associated proteins [BR:
lgu03036
]
LG3211_2911 (ihfB)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_2911 (ihfB)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LG3211_2911 (ihfB)
Chromosome and associated proteins [BR:
lgu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LG3211_2911 (ihfB)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LG3211_2911 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ALN91875
LinkDB
All DBs
Position
complement(3254928..3255230)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSELIEILSQRQAHLKGDDVDLAVKALLEMMGGALSAGERIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSGVTPLDEEA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagctcatcgagatcctttcgcagcgtcaggcccacctcaagggcgac
gatgtggatctggcggtgaaggccttgctggaaatgatgggcggtgccctgtcggccggc
gagcggatcgagattcgcggtttcggcagcttctcgctgcactaccgtccgccgcgcctg
ggccgcaaccccaagaccggcgaatcggtcgcgctgcccggcaagcacgtgccgcacttc
aagcccggcaaggaattgcgcgagcgcgtcagcggcgtaacgccgttggacgaggaagcc
tga
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