Lysobacter gummosus: LG3211_3040
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Entry
LG3211_3040 CDS
T04163
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00541
Biosynthesis of various nucleotide sugars
lgu01100
Metabolic pathways
lgu01250
Biosynthesis of nucleotide sugars
Module
lgu_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LG3211_3040 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lgu01005
]
LG3211_3040 (kdsB)
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LG3211_3040 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
lgu01005
]
Lipid A
LG3211_3040 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
ALN91998
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Position
complement(3373113..3374012)
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AA seq
299 aa
AA seq
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MFAAWLLRIRNGPPSPAIVVATAALPYRSETAMSQDFVVAIPARYAASRLPGKPLRTLAG
EPLVLHVARRALAAGASEVWVAADDERIAQALKDSGVQVAMTSPDHASGTDRLAECADIA
GWRDDTVVVNLQGDEPFAPAAGILATAQTLRDSGADMSTLATPVTQVEVLFDPNAVKLVR
AGNGDALYFSRAPIPWPRDAFAKDRERMPGGGEWLRHIGIYGYRAGFLRKFAKMRPGRLE
QIESLEQLRALEAGYRIAVGITPEPFPPGVDTPEDLARAEAHLAAEADATGAGLDGEGG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcggcgtggttgttgcgaatccgcaacggcccgccatcgcccgccatcgtcgtc
gccaccgccgcactgccgtaccgttcggagacagccatgagccaggatttcgtcgtcgcc
attcccgcccgctacgccgcttcgcggctgcccggcaaaccgctgcgcacgctcgccggc
gagccgctggtgctgcacgtcgcgcgccgcgcactggcggcgggcgcgagcgaagtgtgg
gtcgcggccgacgacgaacgcatcgcgcaggcgctcaaggacagcggcgtgcaagtggcg
atgacctcgcccgaccacgcctccggcaccgaccgtctggccgaatgcgccgacatcgcc
ggctggcgcgacgacaccgtcgtggtcaatctgcagggcgacgagcccttcgcgccggcc
gcgggcatcctggccaccgcacagaccttgcgcgacagcggcgcggacatgtccacgctg
gccacgccggtcacgcaggtcgaagtgttgttcgatcccaacgcggtcaagttggtgcgc
gccggcaacggcgatgcgctgtacttcagccgcgcgccgattccgtggccgcgcgacgcc
ttcgccaaggatcgcgaacgcatgcccggtggcggcgaatggctgcggcacatcggcatt
tacggttaccgcgccggattcctgcgcaagttcgccaagatgcggcccggacgcctggag
cagatcgagtcgctggagcaattgcgcgcgctggaagccggttaccgcatcgcggtcggc
atcacgcccgagccgttcccgcccggcgtggacacgccggaggatctggcccgggccgag
gcgcatctggccgccgaagcggacgcgaccggcgcaggcctggacggcgagggcggttga
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