Lysobacter gummosus: LG3211_3133
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Entry
LG3211_3133 CDS
T04163
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgu03009
]
LG3211_3133 (rimO)
Enzymes [BR:
lgu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LG3211_3133 (rimO)
Ribosome biogenesis [BR:
lgu03009
]
Prokaryotic type
ribosomal protein modification factors
LG3211_3133 (rimO)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALN92091
LinkDB
All DBs
Position
complement(3476213..3477571)
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AA seq
452 aa
AA seq
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MSSASVAPANPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDDADVVVVNTCGFID
SAVTESLDAIGEAIAENGKVIVTGCLGKRSELIREAHPGVLSISGPQDYGSVMSAVHAAL
PPKHDPFLDLVPRRDDGIGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDDV
LREAEKLAMGGVKELLVISQDTSAYGVDVKYAEREWRGKRYQTRMKAMCEGLSELGIWTR
LHYVYPYPHVDDIIPLMAEGKLLPYLDIPFQHASPRVLKLMKRPGAVDKTLERIQRWRSI
APDIAIRSTFIVGFPGETEAEFEELLDFLDQAQLDRVGAFAYSPVDGAKANDLPDPVDED
VKQERLARFMERQAEISANKLEAKIGSVQRCIVDAIDGDLAIARSMADAPEIDGLVQIQN
GLDAGLRVGQFVDVEIMGSDEHDLFGEAVVED
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccagtgtcgcgccagccaatcccaaagtcggtttcgtcagcctgggctgt
cccaaggccctggtcgattccgaacgcatcctcacccagctgcgcgtggagggctacgac
atcgtccagacctacgacgatgccgacgtggtggtggtcaacacctgcggtttcatcgat
tcggcggtgaccgaatcgctggacgcgatcggcgaggcgatcgccgagaacggcaaggtc
atcgtcaccggctgcctgggcaagcgctcggagctgatccgcgaagcgcatccgggcgtg
ttgtcgatcagcggcccgcaggactacggcagcgtgatgagcgcggtgcacgcggcgctg
ccgcccaagcacgatccgttcctggatctggtgccgcggcgcgacgacggcatcggcgtc
aagctcacgcccaagcattacgcgtacctgaagatttccgaaggctgcaatcaccgctgc
agcttctgcatcattccgtcgatgcgcggcgacctggtctcgcggccggtggacgatgtg
ctgcgcgaagccgagaaactggcgatgggcggggtcaaggaactgctggtgatctcgcag
gacacctcggcctatggcgtggacgtcaagtacgccgaacgcgaatggcgcggcaagcgt
taccagacgcggatgaaggcgatgtgcgaaggcctgagcgaactgggcatctggacgcgt
ctgcactacgtgtatccgtatccgcacgtggacgacatcattccgctgatggcggaaggc
aaattgctgccgtacctggacattccgttccagcacgccagcccgcgcgtgctcaagctg
atgaagcgcccgggcgcggtcgataagaccctggagcgcatccagcgctggcgctcgatc
gcgccggacatcgcgatccgcagcaccttcatcgtcggcttcccgggcgagaccgaggcc
gaattcgaggaactgctggatttcctcgatcaagcccagctcgaccgcgtcggcgcgttc
gcttattcgccggtggacggcgccaaagccaacgatcttcccgatccggtggacgaagac
gtcaagcaagagcgcctggcgcgtttcatggagcgtcaggcggagatttccgcgaacaag
ctcgaagccaagatcggcagtgtgcagcgctgcatcgtcgatgcgatcgacggcgacctg
gcgatcgcgcgctcgatggccgacgcgccggagatcgacggcctggtgcagatccagaac
ggcctggacgcggggctgcgcgtggggcagttcgtggatgtggagatcatgggcagcgac
gaacacgatttgttcggcgaggcggtggtggaggactga
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