Lysobacter gummosus: LG3211_3220
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Entry
LG3211_3220 CDS
T04163
Name
(GenBank) sigma-54 interaction domain protein
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lgu03110
]
LG3211_3220
Chaperones and folding catalysts [BR:
lgu03110
]
Heat shock proteins
HSP100
LG3211_3220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA
PCRF
AAA_5
AAA_22
AAA_29
AAA_18
AAA_16
nSTAND3
T2SSE
Zeta_toxin
nSTAND_NTPase5
DUF815
AAA_23
RsgA_GTPase
HerA_C
TIP49
Mg_chelatase
ResIII
DAP3
Motif
Other DBs
NCBI-ProteinID:
ALN92175
UniProt:
A0ABY3X5F9
LinkDB
All DBs
Position
3577633..3580980
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AA seq
1115 aa
AA seq
DB search
MEALLLVVGVLTGLILARLYRPDARAAVAVADAAKPEAEDASQSGADESKAPVDTTSETA
ESSQDQLFRLVREIDAVDDRIQRPQDLLAQPEFHQGVELIAGGAFDADELVRQLSGTGYV
LQSMITKALPRRSDVALDPIIDHAGQFGGYPLHFLIEHLRTREDAQALSRLMRHAQAWWW
DFAPVRQQVRDYLQWAEQFGDAPAAPALDEIEENQANQLRETLKRFNSPALQPLLEQVDR
AASARRESRVLGAFGRVNAAPKPQVRIAHDALARQLERLHELLSGEDAASVLVSGEHGVG
KSVLIDLLSERLLADGWLVFEASAAEILSGQSYIGELEERVREMLSVLDRKRAVWRAPEF
FDLLAKGSHSRDPRGLLDLVLPAIERGRLRVIGEITPRQLAQLLVARPVIKHHFEILNLA
ATEAPALEPIAAQWARIESARLGRAVADARTLAEAARMAAQYFPEQQEPGRLLRLLGDAL
QTACAQEPAQLPLDAERLLATIAQRSGLPLEVIDDRQSLDLDRLRAFFRQRVIGQDEAVD
ALLDRIAMLKAGLTDNGRPIGVFLFAGPTGTGKTELAKALGELLFGSDERLLRLDMSEFQ
SEDSAWRLTADEGGQGGVRSLTSRIREQPFSVVLLDEFEKAHPKVWDLFLQVFDDARLSD
RSGHTADFRHSIIILTSNVGSTISRSAGPGFTSVRGGYSRDAVEKALFETFRREFINRLD
RVVLFNPLDRSLMREILHKELGRVLTRRGLRNRDWAVEWEPSAIEFLLDRGFTPDLGARP
LRRAIEHYLLAPLARSIVEHRAPQGDQFLFVRAAGDKLDVVFIDPNAPQALEAAPADETA
APALAGDLRDLVYAPSSSAEAIARLNARLDELDATVESLQWVAAREADYARMAESDFWSA
ADRHGVLDRIERRDRIESALDTAQRMRQRLRQDRGSDEFAGRMAQLLFLLGLAVDGLREH
TPQDALIEIDTDDAGHLRFGADLRLWWQQLLSMYLGWAQRRNMRVEVLRQDAERCKAWLA
VSGFGAYDLLRGESGLHVFEELDDGVTRRVSLSVQVAPDLPGRARVAQAASDGDKRICRR
YRQSPSPLVRDGVRGWRSGRLDRVLAGEFDVVQGS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcattgttgctcgtcgtcggcgtattgaccggcttgatccttgctcgtctttat
cgtcccgatgcgcgagcggcggtggcggtggcggacgctgccaagccggaagccgaggac
gcttcgcaatcgggcgcggatgagagcaaagcgccggttgatacgacttcggaaactgcg
gaatcttctcaggatcaactttttcggttggtacgcgagatcgacgccgtcgacgaccgc
atccagcgcccgcaggacctgctcgcacagcccgagttccaccagggcgtggagctgatc
gcaggcggcgccttcgatgcggacgaactggtgcgccaactcagcggcaccggctacgtg
ctgcagtcgatgatcaccaaggcgttgccgcgccgcagcgatgtcgcgctcgacccgatc
atcgaccacgccggccagttcggcggttatccgctgcacttcctcatcgaacatctgcgc
acccgcgaggacgcgcaggcgctgtcgcggctgatgcggcatgcgcaggcgtggtggtgg
gatttcgcgccggtgcgccagcaagtgcgcgactacctgcagtgggcagagcaattcggc
gacgccccggcggcgccggcgctcgacgagatcgaggaaaaccaggccaaccagttgcgc
gaaacgctcaagcgcttcaattcgccggcgctgcagccgctgctggaacaggtcgaccgc
gccgccagcgcgcgccgcgaaagccgcgtgctcggcgccttcggccgggtcaacgccgcg
cccaagccgcaggtgcgcatcgcccacgacgcgctcgcgcgccagctcgaacgcctgcac
gaactgctcagcggcgaggatgccgcctcggtgctggtgtcgggcgaacacggcgtcggc
aagagcgtgctgatcgacctgctcagcgaacgccttctcgccgacggctggctggtgttc
gaagcctcggccgcggagatcctctccggccagagctacatcggcgaattggaagagcgc
gtgcgcgaaatgctgtcggtgctcgaccgcaaacgcgcggtgtggcgcgcgccggagttc
ttcgacctgctggccaagggctcgcactcgcgcgatccgcgcggcctgctcgatctggtg
ctgccggcgatcgaacgcggccgcttgcgcgtgatcggcgaaatcaccccgcgccagctc
gcgcagttgctggtcgcgcggccggtgatcaagcaccacttcgaaattctcaatctggct
gcgaccgaagcgccggcgctggagccgatcgcggcgcaatgggcgcgcatcgaaagcgcg
cgcctgggccgcgccgtcgccgacgcacgcaccttggccgaggccgcgcgcatggccgcg
cagtattttcccgaacagcaggaacccggacgcctgctgcgcctgctcggcgacgccctg
cagacggcgtgcgcgcaggagccggcgcaactgccgctcgacgccgagcgcctgctcgcc
accatcgcccagcgcagcggcctgccgctggaggtcatcgacgatcgccagagcctggac
ctggaccggctgcgcgcgttcttccgccaacgcgtgatcggccaggacgaagccgtcgat
gccctgctcgaccgcatcgccatgctcaaggccgggctgaccgacaacggccgtccgatc
ggcgtgttcctgttcgccggccccaccggcaccggcaagaccgaacttgcgaaggcgctg
ggcgaattgctgttcggtagcgacgaacgcctgctgcgcctggacatgagcgaattccag
tcggaagactcggcctggcgcctgaccgccgacgaaggcggacaaggcggcgtgcgctcg
ctgacctcgcgcatccgcgagcagccgttctcggtggtactgctggacgaattcgaaaaa
gcgcatccgaaggtgtgggacttgttcctgcaggtgttcgacgacgcgcgcctgagcgat
cgcagcggccacaccgccgacttccgccacagcatcatcatcctcaccagcaacgtcggc
tcgaccatctcgcgcagcgccggcccgggcttcacttcggtgcgcggcgggtattcgcgc
gatgcggtcgagaaggccctgttcgaaaccttccgccgcgagttcatcaatcgcctggac
cgggtggtgttgttcaatccgctcgatcgcagcctgatgcgcgagatcctgcacaaggaa
ctgggccgggtgctgacccggcgcgggctgcgcaatcgcgactgggcggtggaatgggag
ccctcggcgatcgagttcctgctcgaccgcggcttcaccccggacctgggcgcgcgcccg
ctgcggcgcgcgatcgagcattacctgctggcgccgctggcgcgcagcatcgtcgagcac
cgcgcgccgcagggcgatcagttcctgttcgtgcgcgccgcaggcgacaagctcgatgtg
gtgttcatcgatccgaacgcgccgcaggcgctggaagccgcgcccgccgacgaaaccgcg
gcgccggcgctggccggcgatctgcgcgatctggtctacgcgccgtcctcctccgccgag
gccatcgcgcgattgaacgcgcgcctggacgaactcgacgccacggtcgaatcgctgcag
tgggtggccgcgcgcgaagccgattacgcgcgcatggccgagtccgacttctggtcggcg
gccgaccgccacggcgtgctcgaccggatcgaacgccgcgaccgcatcgaaagcgcgctc
gacaccgcccagcgcatgcgccagcgcctgcgccaggaccgcggcagcgacgaattcgcc
ggacgcatggcccagttgctgttcctgctcgggctggcggtggacggcctgcgcgaacac
acgccgcaggacgcgctgatcgagatcgacaccgacgacgccggccatctgcgcttcggc
gccgatctgcgcctgtggtggcagcaactgctgtcgatgtacctgggctgggcgcagcgt
cgcaacatgcgcgtggaagtgctgcgccaggacgccgagcgctgtaaggcctggctggcg
gtcagcggtttcggcgcttacgacctgctgcgcggcgaatcgggcctgcatgtgttcgag
gaactcgacgacggcgtcacccgccgcgtgagcttgtcggtgcaggtcgcgcccgacctg
cccggccgcgcgcgcgtggcgcaggcggcgtccgacggcgacaagcgcatctgccggcgt
taccgccagtcgccctcgccgctggtgcgcgacggcgtgcgcggttggcgcagcggccgc
ctggatcgcgtgctggcgggcgaattcgacgtggtccagggtagctga
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