Lysobacter gummosus: LG3211_3232
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Entry
LG3211_3232 CDS
T04163
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu02024
Quorum sensing
lgu03060
Protein export
lgu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LG3211_3232 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LG3211_3232 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LG3211_3232 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lgu02044
]
LG3211_3232 (ffh)
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LG3211_3232 (ffh)
Secretion system [BR:
lgu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LG3211_3232 (ffh)
Eukaryotic Sec-SRP protein
LG3211_3232 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_16
CbiA
Helicase_RecD
cobW
AAA_33
ABC_tran
YqeC
APS_kinase
DO-GTPase1
AAA_30
GTP_EFTU
NACHT
KTI12
AAA_14
ATP_bind_1
AAA_31
AAA
AAA_19
AAA_5
Thymidylate_kin
TsaE
ATPase
AAA_18
DnaB_C
SR_plectin_7
nSTAND3
AAA_28
AAA_24
AAA_17
AAA_25
NPHP3_N
ResIII
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ALN92187
LinkDB
All DBs
Position
complement(3591084..3592451)
Genome browser
AA seq
455 aa
AA seq
DB search
MFESLTQRLSGTIERLRGRGRLTEENIRESMREVRIALLEADVALPVVQALIERIKVRAV
GQEVLKSLTPGQALIKVVRDELTTVMGSQAADLNLNVPAPAVILLAGLQGAGKTTTVGKL
AKHLKERRKKKVMVVSADVYRPAAIEQLKQLAQQVDVLFFASDASQKPVDIVRAAIADAK
KSYVDVLLVDTAGRLAIDEAMMAEIKALHAAVTPVETLFVVDSMTGQDAATTAKAFSEAL
PLTGVVLTKTDGDARGGAALSVRYVTGRPIKFIGVGEKPDGLDVFHPDRVASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMKDQLEQMQNMGGLHGLMDKLPGMGQI
PESVKNQVTGKEVPRMVAIINSMTKKERRNPGLLNGSRRARIAKGSGLTPADVNKLMKQY
QQMEKMMSKLSGGGMKGLMRGMKGMMGGRGGMPFR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatcactgacccaacgcctctccggcaccatcgagcgcctgcgcggccgcggc
cgtctgaccgaggaaaacatccgcgagtcgatgcgcgaagtgcgcatcgccctgctcgaa
gccgacgtcgcgctgccggtggtgcaggcgctgatcgagcgcatcaaggtgcgcgcggtc
ggccaggaagtgctcaagtcgctgaccccgggtcaggccctgatcaaggtcgtgcgcgac
gagctgaccacggtcatgggctcgcaggccgccgacctgaacctcaacgtgccggcgccg
gcggtgatcctgctcgccggcctgcagggcgcgggcaagaccaccacggtcggcaagctg
gccaagcacctgaaggagcggcgcaagaagaaggtgatggtggtctcggccgacgtttac
cgtccggccgcgatcgagcagctcaagcagctcgcgcagcaggtcgatgtgctgttcttc
gcctccgacgcctcgcaaaagccggtggacatcgtccgcgccgcgatcgccgacgcgaag
aagtcctacgtcgatgtgctgctggtcgataccgccggccgcctggccatcgacgaagcg
atgatggccgagatcaaggcgctgcatgccgcggtcacgccggtggaaaccttgttcgtg
gtcgattcgatgaccggccaggacgcggcgaccaccgccaaggccttcagcgaagcgctg
ccgctgaccggcgtggtgctgaccaagaccgacggcgacgcccgcggcggcgccgccttg
tcggtgcgttacgtcaccggccgtccgatcaagttcatcggcgtcggcgaaaagcccgac
ggcctggacgtgttccatcccgaccgcgtcgccagccgcatcctcgacatgggcgatgtg
ttgtcgctggtcgagcaggtcgagcagcaggtcgacaaggacaaggcgcagaaactcgcc
gagaaggtcgccaagggcaagaagttcgacctcaacgacatgaaggaccagctcgaacag
atgcagaacatgggcggcttgcacggcctcatggacaagctgccgggcatgggccagatc
cccgagtcggtgaagaaccaggtcaccggcaaggaagtgccgcgcatggtcgcgatcatc
aactcgatgaccaagaaagagcgtcgcaacccgggcctgctcaacggctcgcgccgcgcg
cgcatcgccaagggttcgggcctgaccccggccgacgtcaacaagctgatgaagcagtat
cagcagatggagaagatgatgagcaagctctccggcggcggcatgaagggcttgatgcgc
ggcatgaagggcatgatgggcggacgcggcggcatgccgttccgttga
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