Lysobacter gummosus: LG3211_3336
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Entry
LG3211_3336 CDS
T04163
Name
(GenBank) DNA polymerase III, &alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03030
DNA replication
lgu03430
Mismatch repair
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG3211_3336
03430 Mismatch repair
LG3211_3336
03440 Homologous recombination
LG3211_3336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_3336
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3336
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG3211_3336
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG3211_3336
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG3211_3336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALN92290
LinkDB
All DBs
Position
3700669..3704163
Genome browser
AA seq
1164 aa
AA seq
DB search
MHSEYSLADSTIRIGDLVKRCVALGQPAVALTDVDNMFAAVKFYKACEGAGIKPIIGADV
HLADGNETASRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEWLREDNEGLFALA
GRHSLAGRLAASNRDELAHAWLVDWQGVFGDRLHLELTRSQRDGEEAFNAFALHAASKRG
LPVIASNDARFIDAEGYEAHEARVCIASGRVLDDPKRPRDYSAEQFLKSSEEMRELFADV
PDAIDNALALAKRCNVELKLGEYALPDFPVPDDHTIESWLRAQSREGLIKRLEKNPIAPG
KTRQIYDERLETELDVIIKMGFPGYFLIVADFINWAKDHDIPVGPGRGSGAGSLVAWALG
ITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRDRVSQIITYGT
MAAKAVVRDAGRVLGHPYGFVDGIAKLIPNTLGISLDDALGESEAAAKNQELASADLIAR
YRSEDDVRDLLDLARELEDLTRNAGKHAGGVVIAPSPLSDFCPLFAEHDGEGRGKSPVTQ
FDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRRGKEGQGPLDITALELNDQATYELF
ARGDTVAVFQFESRGMRELLKRAKPDTFEDIIALAALFRPGPLGSGMDKDWVDRKHGNAE
VTYPHDSLEPVLGPTYGVIVYQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEEMAKERA
KFEAGCAERNIPAKQASPIFDLMEKFAEYGFNKSHSAAYALVAYQTGWLKRHYPAEFMSA
TCSSDMDNTEKVVNFLDEARVMGLTVLPPHVNESDYMFEAIDATTIRYGIGAVKGVGRGV
CEAIVEARRAGPFSDLLDFCKRVDTGKLNRRALEALAHAGALDGLGRNRASLMLQLPEVL
KVTDQLAKERAAGQVSLFGGFETAAPALHLDLPEADEWPLSQILHGERETLGHYLSGHPF
DPYRDELRNLVGNDLGELETIWEKRPESARSGWRPELDIIVAGQVVGFRKKGDSQMFVQI
EDGRGRLECAFFSETYSEFASMLARDRLLVIQGGLREDAFSGGFALRAARCWDYAQVCAK
HAQRLALRLDLRVPGTWQRVDALLAKQRPGPTPIRLDLLRQGAAGMLDLNGPQSVRVDAD
LVGILRSQPGVTAVKLSLSKPWAN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttgcacagcgagtactcgctggccgactcgacgatccgcatcggcgatctggtcaaacgc
tgcgtcgcgctcggccaaccggccgtcgcgctgaccgacgtcgacaacatgttcgccgcg
gtgaagttctacaaagcctgcgaaggcgccggcatcaagccgatcatcggcgccgacgtg
catctggccgacggcaacgaaaccgcttcgcgcctgaccctgctgtgccgcgaccgcggc
ggctacctgagcctgtcgcgcctgctcagccgcgcctggatggaaggccaccgcaccgaa
ggcgtggtgctgcgtccggaatggctgcgcgaggacaacgaaggcctgttcgcgctggcc
ggccgccacagcctcgccggccgcctggccgcgagcaaccgcgacgagctcgctcacgcc
tggctggtcgattggcagggcgtgttcggcgatcgcctgcacctggagctgacccgctcc
cagcgcgacggtgaggaagccttcaacgccttcgccctgcacgccgccagcaagcgcggc
ctgccggtgatcgccagcaacgacgcgcgcttcatcgacgcggaaggctatgaggcgcac
gaagcgcgcgtgtgcatcgcctcgggccgcgtgctcgacgatcccaagcgcccgcgcgac
tacagcgccgagcagttcctcaagtccagcgaggaaatgcgcgaactgttcgccgacgtg
cccgacgcgatcgacaacgcgctggcgctggccaagcgctgcaacgtcgaactcaagctc
ggcgaatacgcgctgccggatttcccggtgccggacgatcacaccatcgagtcctggctg
cgcgcgcaatcgcgcgaaggcctgatcaagcgcctggagaagaatccgatcgcgccgggc
aagacccggcagatctacgacgagcgcctggaaaccgaactggacgtcatcatcaagatg
gggttccccggttacttcctgatcgtcgcggacttcatcaactgggccaaggaccacgac
atcccggtcggcccgggccgcggttcgggcgcgggttccctggtggcctgggcgctgggc
atcaccgacctggacccgttgccctacgacttgctgttcgagcgattcctcaatcccgaa
cgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgccgcgacgaagtcatc
gactacgtcgcgcgcaagtacggccgcgaccgcgtcagccagatcatcacctacggcacc
atggcggccaaggcggtggtgcgcgacgccggccgcgtgctcggccatccgtacggcttc
gtcgacggcatcgccaagctgattccgaacacgctcggcatcagcctcgacgacgcgctg
ggcgaatcggaagcggcggcgaagaaccaggaactggcgtcggccgatctgatcgcgcgt
taccgcagcgaagacgacgtgcgcgatctgctggacctggcgcgcgaactcgaagacctg
acccgcaacgccggcaagcacgccggcggcgtggtgatcgcgcccagcccgctgtcggac
ttctgcccgctgttcgccgaacacgacggcgagggccgcggcaagagcccggtcacccag
ttcgacaaggacgacgtggaagccgtcggcctggtcaagttcgacttcctcggcctgcgc
acgctcacgatcatcgattgggcggtcaaggcgatcaacaagcgccgcggcaaggaaggc
cagggcccgctcgacatcaccgcgctcgaactcaacgaccaagcgacttacgaactgttc
gcgcgcggcgacaccgtcgcggtgttccagttcgaatcgcgcggcatgcgcgaattgctc
aagcgcgccaagcccgacaccttcgaagacatcatcgcgctggccgccttgttccgtccc
ggcccgctgggctcggggatggacaaggactgggtcgaccgcaagcacggcaacgccgaa
gtcacctatccgcacgacagcctggaaccggtgctggggccgacctacggcgtcatcgtc
taccaggaacaggtgatgcagatcgcccaggtcctggccggctactcgctcggcggcgcg
gacatgctgcgccgcgcgatgggcaagaagaagccggaggaaatggcgaaggagcgcgcc
aagttcgaagccggctgcgccgagcgcaacattccggccaagcaggccagcccgatcttc
gacttgatggagaagttcgccgagtacggcttcaacaagtcgcactccgccgcgtacgcg
ctggtcgcctaccagacgggttggctgaagcgccactacccggccgaattcatgtccgcg
acctgttcgtcggacatggacaacacggaaaaggtcgtcaacttcctcgacgaagcgcgg
gtcatgggcctcaccgtcctgccgccgcacgtcaacgaatcggactacatgttcgaagcc
atcgacgccaccaccatccgctacggcatcggcgcggtgaagggcgtcggccgcggcgtg
tgcgaggcgatcgtggaagcgcgccgcgccggcccgttctcggacctgctggatttctgc
aagcgcgtggacaccggcaagctcaatcgccgcgcgctggaagcgctggcgcacgccggc
gcgctcgacggcctgggccgcaaccgcgccagcttgatgctgcagttgccggaagtgctc
aaggtcaccgaccaactggcgaaggaacgcgccgcgggacaagtctcgctgttcggcgga
ttcgaaaccgccgcgccggcactgcacctggacctgccggaggccgacgaatggccgctg
agccagatcctgcacggcgagcgcgaaaccctcggccactatctcagcggccatcccttc
gatccgtaccgcgacgagttgcgcaacctggtcggcaacgacttgggcgagctggaaacg
atctgggaaaaacgcccggaaagcgcgcgcagcggctggcgtccggagctggacatcatc
gtcgccgggcaagtcgtcggcttccgcaagaagggcgacagccagatgttcgtgcagatc
gaggacggccgcggccgcctggagtgcgcgttcttctccgagacctacagcgagttcgcc
tcgatgctggcgcgcgaccgcctgctggtgatccagggcggcctgcgcgaggacgccttc
agcggcggcttcgccctgcgcgcggcgcgctgctgggactacgcccaggtctgcgccaag
cacgcgcagcgcctggccctgcgtctggacctgcgcgtgcccggcacctggcaacgcgtg
gacgcgctgctggccaagcagcgtcccggcccgacgccgatccgcctggacctgctgcgc
cagggcgcggccggcatgctcgacctcaacggcccgcagtcggtgcgcgtggatgccgat
ctggtcggcatcctgcgctcgcaaccgggtgtgacggcggtgaaattgagcctgtccaag
ccctgggcgaactag
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