Lysobacter gummosus: LG3211_3340
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Entry
LG3211_3340 CDS
T04163
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LG3211_3340 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3340 (xseB)
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LG3211_3340 (xseB)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LG3211_3340 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6687
DUF4062
Motif
Other DBs
NCBI-ProteinID:
ALN92294
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All DBs
Position
3707992..3708267
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AA seq
91 aa
AA seq
DB search
MARKSTTDASPVADFEQSLDALEQLVEKMEHGEMSLEDSLAAYERGVGLYRRCQSALEQA
ELRVRLLTDPQEPASAEPFGNAGPPGSEVDA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaaatccaccacagacgcctcgccggtcgcagatttcgagcagtccctggac
gcgctcgaacaactggtcgagaaaatggagcacggcgaaatgagtctggaagactccctc
gccgcctacgaacgcggggtcgggctctaccgccgctgccagagcgcgctggagcaagcc
gaactgcgcgtgcgcctgctcaccgatccgcaggaaccggccagcgccgagcccttcggc
aatgccggcccgccgggcagcgaagtcgatgcctga
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