Lysobacter gummosus: LG3211_3964
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Entry
LG3211_3964 CDS
T04163
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG3211_3964 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgu03019
]
LG3211_3964 (recQ)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_3964 (recQ)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG3211_3964 (recQ)
Messenger RNA biogenesis [BR:
lgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LG3211_3964 (recQ)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG3211_3964 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HHH_5
HHH
ResIII
DUF6400
Motif
Other DBs
NCBI-ProteinID:
ALN92901
LinkDB
All DBs
Position
4441116..4442933
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AA seq
605 aa
AA seq
DB search
MPSPALEILHRVFGHTAFRGEQAQIVQHVIDGGDALVLMPTGGGKSLCYQIPSLVREGCG
LVVSPLIALMQDQVEAMRQLGVRAAYLNSTLSADAAAEVERQLLAGELDLLYVAPERLLT
GRCLNLLDRAKIALFAIDEAHCVSQWGHDFRPEYRELTILHERWPDIPRIALTATADAPT
QREIAERLTLEDARRFVSSFDRPNVRYRVVHKDNGTRQLLDFLAAHRDESGIVYAFSRKR
VESVAEQLVAAGIKALPYHAGIEASVRAGNQRRFLQEDGVVMVATIAFGMGIDKPDVRFV
AHIDLPKSIEGYYQETGRAGRDGEPAEAWLCYGLGDVVNLRQLIQQGEAGEERKRLELRK
LDSLLGFCESTECRRKSLLGWFGEPHPGDCGNCDNCMEPPQSWDGTTAARKALSCVYRTG
QRFGAGHVIDVLRGAATEKVTRFGHEELSTFGIGSDLDAKQWSSVFRQLVAAGLLEADIE
RHGALRLTADSAPVLRGERALRFRTEAPKAARASTRKARGGASAAPMIDLDPESLIRFNA
LREWRSITAREQNVPAYVIFHDSTLRAIAEHAPDDLDELARIPGIGASKLDRYGEAVLQH
LLDQA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccccgctctagaaatccttcaccgcgtcttcggccataccgcgttccgcggc
gaacaggcgcagatcgtccagcacgtgatcgacggcggcgacgccctggtgctgatgccg
accggcggcggcaaatcgctgtgctatcagatcccctcgctggtgcgcgaaggctgcggc
ctggtggtctcgccgctgatcgcgctgatgcaggaccaggtcgaggcgatgcgccagctc
ggcgtgcgcgcggcgtatctcaactccaccctgagcgcggacgccgccgccgaagtcgag
cgccagttgctcgccggcgaactcgacctgctctacgtcgcgcccgagcgcctgctcacc
gggcgctgcctgaacctgctcgaccgcgccaagatcgccctgttcgccatcgacgaagcc
cactgcgtctcgcaatggggccacgacttccgtcccgaataccgcgaactcaccatcctg
cacgagcgctggcccgacatcccgcgcatcgccctgaccgccaccgccgacgcgccgacc
cagcgcgagatcgccgaacggctgaccctggaagacgcgcgccgcttcgtcagctccttc
gaccgtcccaacgtgcgctaccgcgtcgtgcacaaggacaacggcacccgccagctgctg
gatttcctcgccgcgcatcgcgacgagagcggcatcgtctatgcgttctcgcgcaagcgg
gtggagtcggtggccgagcaactggtcgccgccgggatcaaggcgctgccgtatcacgcc
ggcatcgaagccagcgtgcgcgccggcaaccaacgccggttcctgcaggaagacggcgtg
gtcatggtcgcgaccatcgccttcggcatgggcatcgacaaacccgacgtgcgcttcgtc
gcccatatcgacctgcccaaatcgatcgaaggctattaccaagagaccggccgcgccggc
cgcgacggcgaaccggccgaagcctggctctgctacggcctgggcgatgtggtcaatctg
cgccaactcatccagcaaggcgaagccggcgaagaacgcaagcggctggagctgcgcaag
ctggattccttgctggggttctgcgagtccaccgagtgccggcgcaagagtctgctcggg
tggttcggcgaaccgcacccgggcgattgcggcaactgcgacaactgcatggagccgccg
cagagttgggacggcaccaccgccgcgcgcaaggcgctgtcgtgcgtgtaccgcaccggc
cagcgcttcggcgccggccacgtcatcgacgtgctgcgcggcgcggcgaccgaaaaggtc
acccgcttcggccacgaggaactgagcaccttcggcatcggcagcgacctggatgccaag
cagtggagcagcgtgttccgccagttggtcgccgccggcctgctggaagccgacatcgaa
cgccacggcgccttgcgcctgaccgccgacagcgccccggtgctgcgcggcgagcgcgcc
ctgcgtttccgcaccgaagcgccgaaggccgcgcgcgccagcacgcgcaaggcgcgcggc
ggcgccagcgcggcgccgatgatcgacctggatcccgaatcgctgatccgcttcaacgcc
ctgcgcgaatggcgctcgatcaccgcgcgcgagcagaacgtcccggcctacgtgatcttc
cacgacagcaccctgcgcgcgatcgccgaacacgcgccggacgacctggacgaactcgcg
cgcatccccggcatcggcgcgagcaagctcgaccgctacggcgaggcggtgctgcagcac
ttactcgatcaggcctga
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