Lysobacter gummosus: LG3211_4019
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Entry
LG3211_4019 CDS
T04163
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00860
Porphyrin metabolism
lgu01100
Metabolic pathways
lgu01240
Biosynthesis of cofactors
Module
lgu_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LG3211_4019 (cobD)
Enzymes [BR:
lgu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
LG3211_4019 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
ALN92955
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Position
complement(4504858..4505787)
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AA seq
309 aa
AA seq
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MPLALAMLAGVLLDALLGEPRRAHPLVAFGRLARAIESILHRDSRVRGAMAWLLAVVPFS
AAAWWLQRQLLAWSPWADGVYAAAALYFAIGLRSLREHATPVAAALAAADLPAARAAVGR
IVSRDTQALDAERVAAAATESVLENGSDAVFAALFWFAVLGPAGVVLYRLANTLDAMWGY
RTARYRRFGWAAARIDDVLNWIPARLTAMTYAALGHTGSALRCWRTQASAWDSPNAGPVM
AAGAGALRVRLGGDAPYHGVWESRPLLGEGAAPDADSILRALSLVVRGTAYWLCGFLLLA
FGWWLHADA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggccctggcgatgctggccggcgtgctgctggatgcgctgctgggcgaaccg
cggcgcgcgcatccgctggtggcgttcgggcggctggcgcgcgcgatcgaatcgatcctg
catcgcgacagccgcgtgcgcggcgcgatggcgtggttgctggcggtggtgccgttcagc
gccgcggcgtggtggctgcagcggcaattgcttgcgtggtcgccgtgggccgatggcgtc
tacgccgccgcggccctgtacttcgccatcggcctgcgcagcctgagagaacacgccacg
ccggtggccgccgctctggccgccgccgatctgccggccgcgcgcgcagcggtcgggcgc
atcgtcagccgcgatacgcaggcgctcgacgccgagcgcgtggccgcggcggcgaccgaa
tcggtgctggagaacggcagcgacgcggtgttcgcggcgctgttctggttcgccgtgctc
ggcccggccggcgtggtgctgtatcggctggcgaacacgctggatgcgatgtggggttat
cgcaccgcgcgctatcgacgcttcggttgggcggcggcgcgcatcgacgacgtgctcaac
tggattcccgcgcgcctgaccgcgatgacttacgccgcgctcggccacaccggcagcgcg
ctgcgttgctggcgcacccaggcgagcgcctgggacagcccgaacgcgggcccggtgatg
gccgccggcgcgggcgcgctgcgggtgcggctgggcggcgacgcgccgtatcacggcgtg
tgggaatcgcggccgttgttgggcgagggcgccgcgcccgacgccgattcgatcctgcgc
gcgctgagtctggtggtgcgcggaaccgcgtactggctgtgcggatttctattgctcgcc
ttcggctggtggctgcatgcggatgcatga
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