Lysobacter gummosus: LG3211_4289
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Entry
LG3211_4289 CDS
T04163
Name
(GenBank) rtcR transcriptional regulator RtcR transcriptional activator
KO
K14414
transcriptional regulatory protein RtcR
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgu03000
]
LG3211_4289
Transcription factors [BR:
lgu03000
]
Prokaryotic type
Other transcription factors
Others
LG3211_4289
BRITE hierarchy
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
NACHT
AAA_22
AAA_19
MCM
AAA_30
ATPase_2
AAA_2
AAA_7
TniB
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ALN93223
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Position
4803998..4805593
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AA seq
531 aa
AA seq
DB search
MKRQVVIGMLGTQLDAAGYGPGRWEKWRPTVSLGMHEDFLLDRLELLVDERRFAQLAQQV
GEDLAQVSPETRVRRHDTFLADPWDFEAVYGVLDDFVRGYDFRPEEEDYYVHITTGTHVS
QICWFLLTESRLFPGRLLQTAPPRKQKGTNPGSYALIDLDLSRYDRIAQRFAEQRLHDRD
LLKSGIATRNPAFNRMIEQIETVATRSKSPMLLMGPTGAGKSQLARRVFDLKKQKHQLPG
RFVEVNCATLRGDGAMSTLFGHIKGAYTGASADRAGLLRSAHQGLLFLDEIGELGLDEQA
MLLRALEEKRFLPVGGDKEVESDFQLIAGTNRDLQVSVLEGRFREDLLARLNLWTYRLPG
LAERAEDIEPNLDFELERHSRENHQRVMFNKEARERYLAFARGGDASWSGNFRDLGASVM
RLATLAEGGRIRIDLVEEEIARLRRQWHGAPTQASALERVLGEDAARLDRFERVQLEDVL
RVCAQAKSLSQAGRELFAVSRASKASSNDADRLRKYLARFGLDWERVKARD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccaagtagtgatcggcatgctcggcacccagctcgatgcggccggctacggc
ccgggccgctgggagaagtggcggccgaccgtgtcgctgggcatgcacgaggatttcctg
ctcgaccggctggagctgctggtcgatgagcgccgcttcgcccaactcgcccagcaggtc
ggggaggatctggcccaggtctcgccggagacccgcgtgcgccgccacgacaccttcctc
gccgacccatgggatttcgaagccgtctacggcgtgctcgacgacttcgtgcgcggttac
gacttccgccccgaggaagaggactactacgtccacatcaccaccggcacccacgtcagc
cagatctgctggttcctgctcaccgaaagccgcctgttccccggccgcctgctgcagacc
gcgccgccgcgcaagcaaaaaggcaccaacccgggctcgtatgcgctgatcgatctggat
ctgtcgcgctacgaccgcatcgcccagcgtttcgccgagcagcgcctgcacgatcgcgat
ctactcaagagcggcatcgccacgcgcaatcccgcgttcaaccgcatgatcgagcagatc
gaaacagtggccacgcgctcgaagtcgccgatgctgctgatgggcccgaccggcgccggc
aagagccagctggcgcggcgcgtgttcgatctgaaaaagcagaagcatcaactgcccgga
cgcttcgtcgaggtgaactgcgcgacgctgcgcggcgacggcgcgatgagcaccttgttc
ggccatatcaagggcgcctacaccggcgcttcggccgatcgcgccgggctgctgcgttcg
gcgcaccagggcctgctgttcctggacgaaatcggcgaactgggcctggacgaacaggcc
atgctgctgcgcgcgctggaggagaaacgcttcctgccggtcggcggcgacaaggaagtc
gaaagcgatttccagttgatcgccggcaccaaccgcgacttgcaggtgtcggtgctggaa
ggccgtttccgcgaggacttgctggcgcgactgaatctgtggacctaccgcctgcccggc
ctggccgagcgcgcggaagacatcgagcccaacctggatttcgaactcgaacggcattcg
cgcgagaaccaccagcgggtcatgttcaacaaggaagcgcgcgaacgctacctcgccttc
gcccgcggcggcgacgccagttggagcggcaacttccgcgatctgggcgcgtcggtgatg
cgtctggcgaccctggccgaaggcgggcgcatccgcatcgatctggtcgaagaggaaatc
gctcgcctgcgccggcaatggcacggcgcgccgacgcaggcttcggcgctggaacgcgtg
ctcggcgaagacgccgcgcgcctggaccgtttcgaacgcgtgcagctggaggacgtgctg
cgcgtatgcgctcaggccaagagcctgtcgcaagccggccgcgaattgttcgcggtgtcg
cgcgcgagcaaggccagcagcaacgatgccgaccggctgcgcaagtatctggcgcggttc
ggcctggattgggagcgggtgaaggcgcgggactga
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