Lysobacter gummosus: LG3211_4438
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Entry
LG3211_4438 CDS
T04163
Symbol
dacC
Name
(GenBank) penicillin-binding protein 6
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00550
Peptidoglycan biosynthesis
lgu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LG3211_4438 (dacC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgu01002
]
LG3211_4438 (dacC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
LG3211_4438 (dacC)
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LG3211_4438 (dacC)
Peptidases and inhibitors [BR:
lgu01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LG3211_4438 (dacC)
Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LG3211_4438 (dacC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ALN93372
LinkDB
All DBs
Position
complement(4966483..4967736)
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AA seq
417 aa
AA seq
DB search
MIVRFTPRAAAFAALTSAFLVTAFAGFASAQAPAKPAATAAVTPAAALPPASDSLPVPPP
PQIQGTAWVLIDAASGNILASFNPDLRVEPASITKVMTSYVIAAELKGGKVKDTDQVMMT
ENAWRKGGAATDGSYSGFAVNQTAPLTEMEKGMVVQSGNDAAIALAEHVAGSEDAFAALM
NQYAARIGLKNSHFMNPHGLSQENHYSTAHDLALLGRALIHDFPVAYSYNKIKELKVGPI
TQPNRNLLLWRDNTVDGIKTGHHSKAGYCLMASALRGDQRLISVVMGSTSEAQRATDSQA
LLNWGFRFFETHKLYDAGKAVAKQKVWKGQSPEVQLGVAEPMLVTVPRGKYAQLKPSIDV
PKSLVAPIKKGQAIGTVKVMLDGKVIAQRPLVAIAAVEEGGFFKRLWDEFWMWWESE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttcgcttcaccccccgcgcggccgccttcgccgcgctgacctcggcctttctg
gtcacagccttcgccggattcgccagcgcgcaggcgccggccaagcccgccgccaccgcc
gcggtcaccccggccgcggcgctgcctccggccagcgattcgttgccggttccgccgccg
ccgcagatccagggcaccgcgtgggtgctgatcgacgcggccagcggcaacatcctggcc
agcttcaatccggatctgcgggtcgagccggccagcatcaccaaggtcatgaccagctac
gtcatcgccgccgagctcaagggcggcaaggtcaaggacaccgaccaggtgatgatgacc
gagaacgcctggcgcaaaggcggcgcggccaccgacggcagctactccggtttcgcggtc
aaccagaccgcgccgctgaccgagatggagaagggcatggtggtgcagtccggcaacgac
gccgcgatcgccctggccgaacacgtcgccggcagcgaagacgccttcgccgcgctgatg
aaccagtacgccgcgcgcatcggcctgaagaattcgcacttcatgaacccgcacggcctg
tcgcaggagaatcactactccaccgcgcacgatctggccctgctgggacgcgcgttgatc
cacgatttcccggtcgcgtactcgtacaacaagatcaaggaactcaaggtcgggccgatc
acccagcccaaccgcaacctgctgctgtggcgcgacaacaccgtcgacggcatcaagacc
ggccaccactccaaggccggctactgcctgatggcctcggccctgcgcggcgaccagcgc
ctgatctcggtggtcatgggttcgacctccgaagcccagcgcgccaccgacagccaggcg
ctgctcaactggggcttccgcttcttcgaaacgcacaagctctacgacgccggcaaggcc
gtggccaagcagaaggtgtggaagggccagtcgccggaagtccagctcggcgtcgccgag
ccgatgctggtgaccgtgccgcgcggcaagtacgcgcagctcaagcccagcatcgacgtg
cccaagagtctggtcgcgccgatcaagaagggccaggccatcggcacggtcaaggtcatg
ctcgacggcaaggtcatcgcccagcgtccgctggtggcgatcgccgcggtcgaggaaggc
ggcttcttcaagcggctgtgggatgagttctggatgtggtgggagtcggagtga
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