Lysobacter gummosus: LG3211_4482
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Entry
LG3211_4482 CDS
T04163
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00300
Lysine biosynthesis
lgu00470
D-Amino acid metabolism
lgu01100
Metabolic pathways
lgu01110
Biosynthesis of secondary metabolites
lgu01120
Microbial metabolism in diverse environments
lgu01230
Biosynthesis of amino acids
Module
lgu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LG3211_4482 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LG3211_4482 (dapF)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LG3211_4482 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALN93416
UniProt:
A0ABY3XDP1
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Position
complement(5014920..5015780)
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AA seq
286 aa
AA seq
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MAESAIAAAAPQRFSKMHGAGNDFVVLDLRGGQPQPDAALCRHFADRHLGVGCDQILTIE
DPLSEGAVASYRIWNSDGSASQQCGNGARCIAAWLVRDGAAGESSFAVDSPAGRHAVWPL
GEGYYRIDMGRPEFDPARIPLRGYSTRQDQYVLDVHDTVIGFGAVSMGNPHAVIEVDDVD
AAPVETIGPMLQSSAEFPESANVGFAQVIAPDRIRLRVYERGVGETLACGSGACAAAAVL
MQRGRIQREVAVQLPGGELRIVWPDDDSTLSMSGPTAFVFEGEWNR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtccgcgatcgccgcggccgcgccgcaacgtttcagcaagatgcacggcgcc
ggcaacgacttcgtcgtgctggatctgcgcggcggccagccgcaacccgacgccgcgctg
tgccgccacttcgccgaccgccacctcggcgtgggctgcgatcagatcctcaccatcgaa
gacccgctcagcgagggcgcggtcgcctcctaccggatctggaattccgacggctcggcc
tcgcagcaatgcggcaacggcgcgcgctgcatcgccgcctggctggtccgcgacggcgcc
gccggcgagagcagcttcgcggtggacagcccggccggacgccacgcggtgtggccgctc
ggcgagggctactaccgcatcgacatgggccggcccgagttcgatcccgcgcgcatcccg
ctgcgcggctattcgacccgccaggaccagtacgttctcgacgtccacgacaccgtgatc
ggtttcggcgcggtgtcgatgggcaatccgcacgcggtgatcgaagtggacgacgtcgat
gccgcgccggtggagaccatcgggccgatgctgcaatccagcgcggagtttcccgaatcg
gccaacgtcggtttcgcgcaagtcatcgcgcccgaccgcatccgcctgcgcgtgtacgag
cgcggcgtcggcgaaaccctggcctgcggcagcggcgcctgcgccgccgcggcggtgctg
atgcagcgcggccgcatccagcgcgaggtcgccgtgcaattgcccggcggcgagttgcgc
atcgtctggcccgacgacgacagcaccttgtcgatgtccgggccgaccgcattcgtattc
gaaggagaatggaaccgatga
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