Lysobacter gummosus: LG3211_4571
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Entry
LG3211_4571 CDS
T04163
Name
(GenBank) helix-turn-helix domain, rpiR family protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgu03000
]
LG3211_4571
Transcription factors [BR:
lgu03000
]
Prokaryotic type
Helix-turn-helix
Other families
LG3211_4571
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ALN93505
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Position
5117316..5118173
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AA seq
285 aa
AA seq
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MSDNLIPVIRGALDQLRPAERKVGEVVLADLDFSIHASISELAARAGVSEPSVTRFCRAV
GCESLRQFKVQLAHSLAAGVPYQAVTIDKDDDAATLVHKVCDSISVALQDVRERIDPAAL
DAAAALIAGARRVCCIGVGSGSGVVAQDAFLRFLRLDIAASAHSDGHLQRLAAGMLDTRD
VLLAISLSGRSPEINDSVRIAKERGARVIALTHMGTPLGWDADVPLLLPPSSAATPYSPG
VSRLMQLTVIDMLAIAVALRQEPEVLEKARRAKAELERMQSPRRA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaacctgattccggtgatccgcggcgcgctcgatcagctgcgcccggccgag
cgcaaggtcggcgaagtggtgctggccgacctggatttctccatccacgccagcatcagc
gaactggccgcgcgcgccggcgtgtccgagcccagcgtgacccgcttctgccgcgcggtc
ggctgcgaaagcctgcgccagttcaaggtgcagctggcgcacagcctggccgcgggcgtg
ccgtaccaggccgtcaccatcgacaaggacgacgacgcggcgaccttggtgcacaaggtc
tgcgacagcatcagcgtggccctgcaggacgtgcgcgaacgcatcgacccggccgcgctc
gacgccgccgcggccttgatcgccggcgcgcgaagggtctgctgcatcggcgtgggctcg
ggctccggcgtggtcgcgcaggacgcgttcctgcgcttcctgcgcctggacatcgccgcc
agcgcgcacagcgacggccacctgcagcggctggccgcgggcatgctcgacacccgcgac
gtgctgctggcgatctcgctgtccggacgcagcccggagatcaacgacagcgtgcgcatc
gccaaggaacgcggcgcgcgggtgatcgcgctgacccacatgggcacccctttgggctgg
gacgcggacgtgccgctgctgttgccgccctcgagcgcggccacgccgtattcgccgggc
gtgtcgcggctgatgcagctgacggtgatcgacatgctggcgatcgcggtggcgctgcgg
caggaaccggaagtgctggaaaaggcccggcgcgcgaaagccgagctggaacgcatgcaa
tcgccgaggcgcgcatga
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